Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3622 ATGGAGGAAGGATACCCCAGAAGCAAGTTCAAGACGGTGTGTGTCTTCTGTGGCAGCAACTCTGGCAACCGACAAGTCTTCAGTGACTCTGCGATTCAATTGGGCAATGAACTGGTTAAGAGGAACATAGACTTGGTCTATGGTGGGGGCAGTGTTGGGTTGATGGGCCTAATATCTCAGAGAGTGTATGATGGAGGCTGCCATGTCCTAGgGATCATTCCAAAAGCTCTCATGCCTCTCGAGATATCTGGTGAAACAGTAGGTGAAGTGAGAATTGTTTCAGATATGCATGAGCGTAAGGCTGCAATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGGTATGGAACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATTCATAAAAAACCGGTTGGTCTACTGAATGTTGACGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTAAAGAAGGCTTCATTAAGCCTGGTGCACGGAATATAGTTCTCTCTGCTCCGTCAGCCAAAGAACTTATGATGAAGATGGAGCATTACACTCCTTCGCATGAACATGTTGCTCCTCATGAGAACTGGCAGATGAAGCAATTAGGTAATTATCCAGGACGAGAAAATGCAGAGTGA 651 0.4531 MEEGYPRSKFKTVCVFCGSNSGNRQVFSDSAIQLGNELVKRNIDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPGARNIVLSAPSAKELMMKMEHYTPSHEHVAPHENWQMKQLGNYPGRENAE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3622 216 PANTHER LOG FAMILY PROTEIN YJL055W 8 206 - -
Ssu1g3622 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Ssu1g3622 216 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Ssu1g3622 216 MobiDBLite consensus disorder prediction 193 216 - -
Ssu1g3622 216 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 206 - -
Ssu1g3622 216 SUPERFAMILY MCP/YpsA-like 9 188 - -
Ssu1g3622 216 Gene3D - 9 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3622 Ssu-Chr1 91726043 91728403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3622 K22522 - gmx:100785484 419.853