Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3615 ATGGATCAGTTCAAAGGACAGCCTCGTCTTCCAAAATTCGCCGTTCCGAAACGCTACGACATTAGGCTCAAGCCCGACCTCGTCGCCCACCGTTTCGCAGGTTCCGTCGCCGTCAACCTCGACATCGTCGCCGCCACCTCTTTCATCGTTCTCAATGCCGCCGAACTCTCCGTCAGCACCGACGCCGTTTCGTTCACCAACCAAGATTCCTCCAAGGTTCTTAAACCTTCAAGAGTTGAGTCGtttgaaaatgatgaaattCTGGTGTTGGAATTTTCAGAGAAAATACCCATTGGGTTGGGTGTCTTGGCCATTCGCTTTGAAGGAATCTTGAATGATAGAATGAAAGGGTTCTACAGAAGCACCTATGAGCATAATGGTGAGAAGAAGACTATGGCAGTTACACAGTTTGAACCAGCTGATGCCAGGCGATGCTTTCCTTGTTGGGACGAACCTGCTTGCAAGGCTACTTTCAAGATCACATTGGATGTTCCTGCAGAGCTTGTTGCTCTTTCCAACATGCCAATTGTTGAAGAAATAacagatggaaatctcaaaacaGTTTCGTATCAAGAATCACCAATCATGTCTACATATTTGGTTGCGGTCGTCGTTGGTTTGTTTGATTATGTGGAAGATCATACCTCCGATGGGGTCAAAGTCCGAGTGTATTGTCAAGTTGGTAAGGCAAACCAGGGGAAATTTGCACTTGATGTAGCTGTGAGAACTTTGGAATTATACAAAGGTTACTTTGCCACTCCCTACTCCCTGCCAAAATTGGATATGATTGCAATCCCTGATTTTGCTGCTGGAGCCATGGAGAATTATGGTTTAGTTACATATCGGGAAACTGCTTTGCTATATGATGATCAGCATTCTGCTGCTGCAAACAAACAGAGGGTTGCGACTGTTGTAACTCATGAACTAGCACACCAGTGGTTTGGTAATCTTGTTACAATGGAGTGGTGGACACATTTATGGCTGAATGAGGGGTTTGCAACATGGGTGAGCTATTTAGCTACTGATAGCTTGTTTCCTGAGTGGAAAATATGGTCTCAATTTCTTCATGAATCTACTGAGGGTCTGAGGTTGGATGGACTTGCAGAATCCCACCCAATTGAGGTGGAGATAAATCATGCTTGTGAGattgatgaaatatttgatgCAATAAGTTATAGAAAGGGTGCATCTGTAATTAGGATGCTGCAAAGCTATCTTGGTGCAGAATGCTTTCAGAGGTCGCTGGcttcatatataaaaagacatgCATGCTCAAATGCTAAGACCGAGGATCTATGGGCTGCACTTGAGGAAGGATCTGGTGAACCTGTGAACAAGTTAATGACTTCGTGGACAAAGCAGAAGGGATATCCTGTTGTATCGGTTAAAGTCAATGATCAGAAATTGGAATTTAATCAGTCACAATTCTTGTCAAGTGGTGCTCAAGGAGAAGGCCATTGGATTGTTCCAATAACACTATGCCTTGGTTCTTATGACGTCCGCAAGAATTTCCTCTTGCAAACAAAATCTGAAACACATGATGTTAAAGAGCTCCTCAGTTCTCAAATTGCTGAAGACAAAGGTGTAAATTGTTGGATTAAGCTTAATGTGGATCAGGCTGGTTTCTACAGGGTGAAATATGATGAGCTGCTTGCATCTAGACTTAGATATGCTGTAGAGAAACAACTCTTATCTGCATCAGATCGATTTGGCATTTTGGATGATTCATATGCACTTTGTATGGCTCGCCAAGAATCATTGACCTCCTTGATTAACTTGATGGGATCTTACAGGGAGGAAGTTGATTATACCGTGCTGTCTAACCTGATAACTATAAGTCATAAAATTGAACGCATTGCAGCTGATGCAGTACCAGACTTGCTAGATTATTTCAAGCAGTTCTTTATTAACCTTTTCCAGTACTCTGCTGAGAAGCTTGGTTGGGAGCCTAAACCAGGAGAAAGTCATCAAGATGCAATGTTGAGAGGAGAAATTTTGACTGCCCTTGCTGTGTTTGGTCACGATTTGACACTGGATGAAGCAAGCAAGCGTTTTCAGGCATTCTTAGAAGACAGAAATACACCACTTCTTCCACCTGATATAAGAAAGGCGACATATGTAGCTGTAATGCAACGGGCAAGCAAATCTAACCGATTGGGTTATGATTCCCTTTTGAAAGTATATAAAGAAAGTGACCTAAGTCAGGAGAAAACACGAATTCTGGGCTCTCTGGCATCTTCACGTGATCCAGATCTAATTTTTGAAGCTCTTAACTTCATGTTGTCATCTGAGGTTCGTAGTCAGGATGCCGTTTTTGGACTTGCTGTTACTCGGGAAGGACGAGATGTAGCTTGGGCATGGCTTAAGGAAAATTGGGAACACCTCACAAAAACATATGGTCCAGGATTTTTGATAACTCGTTTTGTTAGTGCGGTTGTCTCACCGTTTGCTTCCTTTGAGAAGGCCAAGGAGGTAGAGGAATTCTTTGCTACCCATGCTATGCCCTTCATCGCTAGAACGTTAAGGCAGAGCCTTGAGCGGGTTAATATCAATGCAAACTGGGTTCAGAGTGTTCAGAAGGAAAATAGGCTTGCTGATGCTGTGAAGGAATTGGCATACAGAAAATACTAG 2631 0.4223 MDQFKGQPRLPKFAVPKRYDIRLKPDLVAHRFAGSVAVNLDIVAATSFIVLNAAELSVSTDAVSFTNQDSSKVLKPSRVESFENDEILVLEFSEKIPIGLGVLAIRFEGILNDRMKGFYRSTYEHNGEKKTMAVTQFEPADARRCFPCWDEPACKATFKITLDVPAELVALSNMPIVEEITDGNLKTVSYQESPIMSTYLVAVVVGLFDYVEDHTSDGVKVRVYCQVGKANQGKFALDVAVRTLELYKGYFATPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVTHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWSQFLHESTEGLRLDGLAESHPIEVEINHACEIDEIFDAISYRKGASVIRMLQSYLGAECFQRSLASYIKRHACSNAKTEDLWAALEEGSGEPVNKLMTSWTKQKGYPVVSVKVNDQKLEFNQSQFLSSGAQGEGHWIVPITLCLGSYDVRKNFLLQTKSETHDVKELLSSQIAEDKGVNCWIKLNVDQAGFYRVKYDELLASRLRYAVEKQLLSASDRFGILDDSYALCMARQESLTSLINLMGSYREEVDYTVLSNLITISHKIERIAADAVPDLLDYFKQFFINLFQYSAEKLGWEPKPGESHQDAMLRGEILTALAVFGHDLTLDEASKRFQAFLEDRNTPLLPPDIRKATYVAVMQRASKSNRLGYDSLLKVYKESDLSQEKTRILGSLASSRDPDLIFEALNFMLSSEVRSQDAVFGLAVTREGRDVAWAWLKENWEHLTKTYGPGFLITRFVSAVVSPFASFEKAKEVEEFFATHAMPFIARTLRQSLERVNINANWVQSVQKENRLADAVKELAYRKY 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3615 876 Gene3D - 457 547 - -
Ssu1g3615 876 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 215 462 - -
Ssu1g3615 876 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 3 872 - -
Ssu1g3615 876 Gene3D - 549 863 - -
Ssu1g3615 876 Pfam ERAP1-like C-terminal domain 532 849 IPR024571 -
Ssu1g3615 876 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 9 206 IPR042097 -
Ssu1g3615 876 PANTHER AMINOPEPTIDASE 3 872 - -
Ssu1g3615 876 CDD M1_APN-Q_like 18 453 IPR034016 -
Ssu1g3615 876 Pfam Peptidase family M1 domain 235 451 IPR014782 GO:0008237|GO:0008270
Ssu1g3615 876 PRINTS Membrane alanyl dipeptidase (M1) family signature 143 158 IPR001930 GO:0006508
Ssu1g3615 876 PRINTS Membrane alanyl dipeptidase (M1) family signature 323 335 IPR001930 GO:0006508
Ssu1g3615 876 PRINTS Membrane alanyl dipeptidase (M1) family signature 190 205 IPR001930 GO:0006508
Ssu1g3615 876 PRINTS Membrane alanyl dipeptidase (M1) family signature 268 278 IPR001930 GO:0006508
Ssu1g3615 876 PRINTS Membrane alanyl dipeptidase (M1) family signature 304 319 IPR001930 GO:0006508
Ssu1g3615 876 Pfam Peptidase M1 N-terminal domain 15 200 IPR045357 -
Ssu1g3615 876 Gene3D Neutral Protease Domain 2 209 456 IPR027268 -
Ssu1g3615 876 Gene3D tricorn interacting facor f3 domain 3 208 IPR042097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3615 Ssu-Chr1 91568209 91575046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3615 K08776 - gmx:100811437 1643.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3615 1 91568209 91575046 Ssu1g3615 1 91568209 91575046 ECH