Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3610 ATGGAAGGGATAATACAGCTTGCGTACGACACTACGGTGAAGCTGATGCTGGGTGCACTGGAGCGCAACTTGCTACATGACGCCGTCACAAGGAGACTCACGCGCTTGCTGTTGGCTACTCGCCTTCGCTCTGGTTACAAACCATCGTCTGAACTTCAGCTCTCGGCTCTCCTCCACTTTGCACACTCTTTGCAAGAGATGCCCATAGCAATCAACACGGATAAGCCAAAATCTCAACACTATGAATTACCAAACGCTTTCTTCAAGCTGGTGCTCGGGAGGAATCTCAAATACAGCTGTTGCTATTTCTCTTCTGCCTCAATGACTCTGGAAGATGCTGAAGAAGCAATGTTGAAGCTGTACTGTGAGAGATCAAACCTGAAAGATGGTCATACAGTACTTGATGTGGGATGCGGTTGGGGATCGCTGGCTTTATACATTGCCAAGAAGTACACTAACTGCAGGGTTACAGGAATCTGCAATTCCACAACTCAAAAGGTTTTCATTGAGGAGAAGTGCCGGGATCTTCAGCTGCAAAATTTGGATATTATTGTTGCTGATATTAGCACGTTTGAAATGGAAGCTTCTTATGACAGAATATTTTCCATAGAAATGTTTGAGCATATGAAGAATTATAAAGACCTTCTCAAAAAGATATCCAAATGGATGAAAGAGGATAGCCTCTTATTTGTTCATTACTTCTGCCACAAAGCACTTGCCTACCACTTTGAGGACAAAAGTGAAGATGATTGGATTACGAGATACTTCTTTACTGGAGGAACTATGCCTTCAGCAAATCTACTTCTTTATTTCCAAGATGATGTTACAGTCATCAACCATTGGTTAGTAAATGGGAAACACTACGCACAGACCAGTGAAGAATGGCTCAAAAGAATGGACCAGAGAATGACTTTCATCAAGTCAATTATGGAATCAACGTATGGCAAGGATTCAGCTACCAAGTGGACTGCCTATTGGAGAACATTCTTCATAGCTGTAGCAGAACTTTTTGGATACAACAACGGTGAAGAATGGATGGTTGCACACtttcttttcaaaaagaaataa 1068 0.4185 MEGIIQLAYDTTVKLMLGALERNLLHDAVTRRLTRLLLATRLRSGYKPSSELQLSALLHFAHSLQEMPIAINTDKPKSQHYELPNAFFKLVLGRNLKYSCCYFSSASMTLEDAEEAMLKLYCERSNLKDGHTVLDVGCGWGSLALYIAKKYTNCRVTGICNSTTQKVFIEEKCRDLQLQNLDIIVADISTFEMEASYDRIFSIEMFEHMKNYKDLLKKISKWMKEDSLLFVHYFCHKALAYHFEDKSEDDWITRYFFTGGTMPSANLLLYFQDDVTVINHWLVNGKHYAQTSEEWLKRMDQRMTFIKSIMESTYGKDSATKWTAYWRTFFIAVAELFGYNNGEEWMVAHFLFKKK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3610 355 PANTHER - 5 355 - -
Ssu1g3610 355 Pfam Mycolic acid cyclopropane synthetase 78 326 - -
Ssu1g3610 355 PIRSF CmaB 4 354 IPR003333 GO:0008610
Ssu1g3610 355 Gene3D Vaccinia Virus protein VP39 71 349 IPR029063 -
Ssu1g3610 355 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 5 355 - -
Ssu1g3610 355 CDD AdoMet_MTases 132 234 - -
Ssu1g3610 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 350 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3610 Ssu-Chr1 91499504 91502266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3610 78 326 Acyl Lipid Metabolism Gene Families AT3G23510 28.740 1.03e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3610 - - gmx:100818389 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3610 1 91499504 91502266 Ssu1g3610 1 91499504 91502266 ECH