Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3606 ATGGATATCAGGTTGATGGATTTGGACTCTCCGTTGTTCAACACTCTCCAGCGAATCATGGATTTCACAGAGGACGCTGAGAAGAACTTGAATGCCCCCACGCGAACTTACGTGCGCGACGCGAAGGCAATGGCTGCGACTCCTGCGGACGTGAAGGAGTACCCGAACTCTTACGTGTTCGTGATCGACATGCCTGGCTTGAAATCTGGGGACATTAAGGTGCAGGTGGAGGACGACAACGTGCTTCTCATAAGCGGTGAGAGGAAGAGGGAGCAAGAGAAAGAAGGGGTCAAGTATTTGAGGATGGAGAGAAGGGTTGGCAAGTTCATGCGCAAGTTCACGCTCCCTGAGAATGCCAACACAGAGGCGATCTCTGCCGTCTGCCAGGACGGTGTGCTCACTGTCACGGTCAACAAGCTGCCCCCGCCTGAGCCCAAGAAGGCCAAGACTGTCGAGGTTAAGATTGCATGA 471 0.5372 MDIRLMDLDSPLFNTLQRIMDFTEDAEKNLNAPTRTYVRDAKAMAATPADVKEYPNSYVFVIDMPGLKSGDIKVQVEDDNVLLISGERKREQEKEGVKYLRMERRVGKFMRKFTLPENANTEAISAVCQDGVLTVTVNKLPPPEPKKAKTVEVKIA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3606 156 Gene3D - 6 155 IPR008978 -
Ssu1g3606 156 SUPERFAMILY HSP20-like chaperones 14 149 IPR008978 -
Ssu1g3606 156 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 155 - -
Ssu1g3606 156 Pfam Hsp20/alpha crystallin family 50 154 IPR002068 -
Ssu1g3606 156 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 155 - -
Ssu1g3606 156 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 40 156 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3606 Ssu-Chr1 91469341 91469811 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3606 K13993 - gmx:111605749 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3606 1 91469341 91469811 Ssu1g3606 1 91469341 91469811 ECH