Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3591 ATGGCCGTGTCCTCCACCACCGCCACAGTATGTGTTCCTGCTAAGAACATTCCAACCCCTCAAGCACCAAACATCGGATTCTCAAGTACCCTCGCTTTTACCGTGAAACCGCGGCGATTGTTACGCATCAGAAGCTCCTCAGCCGAGACCTCCGACACAGATGTAGATTCAGATAGTTCCATTGAAGTTCCAAAAGAGCCGTCGTCTTTAATTTCTGTTCTTAACGTGGAAAGGGCTCTCCGCGGCTTACCAATTACAGATGCAGATCATTATGGTAGGCTAGGTATTCCAAGAGGATGTCCCTTTGACATGGTGGGGGTTGCGTATAATATCAAGGTCAAAGAATTGAAGAGTCAAAATTTAGAGGAGGACGAACTAGAGAAGAAATTGGAACTTCTCAAAGAATCATACACCATCCTGTCATCGGAAGATGAAAGAAGAATATATGACTGGAGCTTGGCCAGAGCAGAAAATCCAGACAAATACGCTTGGCCGTTCGAGGTTGACATAACACAGTCACGGATCCGAAAAGAAGATCCTCCACCACAGGAACCGGAGGATGTCGGACCAACAAGAGTGGTTGGATACTTCCTACTGGGATGGATAATGTTGTCGTTTGTGTTATCTATTGCActaaacatataa 645 0.4527 MAVSSTTATVCVPAKNIPTPQAPNIGFSSTLAFTVKPRRLLRIRSSSAETSDTDVDSDSSIEVPKEPSSLISVLNVERALRGLPITDADHYGRLGIPRGCPFDMVGVAYNIKVKELKSQNLEEDELEKKLELLKESYTILSSEDERRIYDWSLARAENPDKYAWPFEVDITQSRIRKEDPPPQEPEDVGPTRVVGYFLLGWIMLSFVLSIALNI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3591 214 Coils Coil 116 143 - -
Ssu1g3591 214 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 213 IPR044199 GO:0009535|GO:0010598
Ssu1g3591 214 Gene3D DnaJ domain 85 163 IPR036869 -
Ssu1g3591 214 SUPERFAMILY Chaperone J-domain 88 154 IPR036869 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3591 K23052 - gmx:100793741 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3591 1 91267204 91269740 Ssu1g3591 1 91267204 91269740 ECH