Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3588 ATGGAGTTCTTACTACGTGTAAAGCGTGTGGAGGAGCACGCAAAAGCCAACGGCACCTGGTATGCACCTCACCCTTGGCTCAATCTATTTGTGTCCAAGTCCAACATCGTTGATTTTGATCGTGAGGTGTTCAAGAAGATTCTGAAGGACGGGGTCGATGGCCCCATTTTAGTCTACCCGCTCTTGCGAAACAAgTGGGATAATCGTCACTCAGTGGTGGTGCCGGACAGCGACACCTTCTACATAGTAGCCTTGCTCCGATTCACTCCACCACCCCCGAAGGGCCCCCCAGCTGAACTTTTGGTGGCGCAAAACAATGAGATTATTCAGTTCTGCACAAGCAGAGGCCTTGATTTCAAGCTATACTTTCCTCACTACCAGTCACGGGAAGATTGGATGAAACACTTTGGGAATCAATGGGCCAGATTTATGGAGCGAAAGGCCAATTTTGATCCCATGGCTATCCTTGCACCAGGGCAGAAAATTTTCTCCAGAACCTCTCAACCTCGTTCTATCACATAa 522 0.4866 MEFLLRVKRVEEHAKANGTWYAPHPWLNLFVSKSNIVDFDREVFKKILKDGVDGPILVYPLLRNKWDNRHSVVVPDSDTFYIVALLRFTPPPPKGPPAELLVAQNNEIIQFCTSRGLDFKLYFPHYQSREDWMKHFGNQWARFMERKANFDPMAILAPGQKIFSRTSQPRSIT 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3588 173 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 1 163 IPR015345 GO:0009690|GO:0019139|GO:0050660
Ssu1g3588 173 SUPERFAMILY FAD-linked oxidases, C-terminal domain 1 163 IPR016164 GO:0003824|GO:0050660
Ssu1g3588 173 Gene3D - 123 163 IPR016167 -
Ssu1g3588 173 Gene3D - 1 122 IPR016170 -
Ssu1g3588 173 PANTHER GULONOLACTONE OXIDASE 1 168 - -
Ssu1g3588 173 PANTHER CYTOKININ DEHYDROGENASE 7 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3588 Ssu-Chr1 91211223 91213102 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3588 K00279 - gmx:100795849 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3588 1 91211223 91213102 Ssu1g3588 1 91211223 91213102 ECH