Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3585 ATGGCAAAAACCATGACTATATGGTATCTTTTGGTCACTCTTTCCTTCGTTTGTGCTGCCATTGCTGATACTCAAATCAAAGTTACTAATAACCCTGCGGACAAGTTGGTAGCTGCGATTAATGAAAACAGAACTGCTCACAAGGTATCAACTTTAACTGACAACCCGGGGCTTGCCTGTATTGCTTTACAATACATTAAGGCATACCAGGGTGATTGTGATGCTGTGGGTGGACCTGATGGCAAGAAACCTCCTGAATCTCAATTTGCTGAAGTTTTTGCCCCAAACTGTGGTGTTGAGGCATCAACTCTTGCTCCTATAACTGGTCGTTTCCTGGGGTGCCAGTCTAAGTATGTCCACGCACCTGAGGCATTTTCTGAAATCCTCATAAGGAACCAAAAGAGCTTAGACATACTCTACAGTAAGAATCACACTCAGGTTGGTGCTGCTGTGACAGGTACTGATGGGGGGTCTCCTTATTTCTGGTGTGTGTTGTTTAGCAGTGGCAAACCTAACAAAACCTTCACTTTTGAGAGTGGTGTGGCCAAAATAACAAAACCTGGTTGCTTTAGTGGAGCTAACGATGAGTGCAGTGGCGCTAGTGATTGGTCAGCACTCAATGGGATATGGGTATTTGCCACTTCAGTTCTGATTGCAATGGGGCTTGCTCTTCCATTATGA 681 0.4464 MAKTMTIWYLLVTLSFVCAAIADTQIKVTNNPADKLVAAINENRTAHKVSTLTDNPGLACIALQYIKAYQGDCDAVGGPDGKKPPESQFAEVFAPNCGVEASTLAPITGRFLGCQSKYVHAPEAFSEILIRNQKSLDILYSKNHTQVGAAVTGTDGGSPYFWCVLFSSGKPNKTFTFESGVAKITKPGCFSGANDECSGASDWSALNGIWVFATSVLIAMGLALPL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3585 226 Gene3D CAP 23 172 IPR035940 -
Ssu1g3585 226 PANTHER OS08G0459300 PROTEIN 5 224 - -
Ssu1g3585 226 PANTHER OS08G0459300 PROTEIN 5 224 - -
Ssu1g3585 226 SUPERFAMILY PR-1-like 29 181 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3585 Ssu-Chr1 91173650 91176193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3585 - - ccaj:109816134 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3585 1 91173650 91176193 Ssu1g3585 1 91173650 91176193 ECH