Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3583 ATGGGTGTGAACGCTAATGACTCGTCCACCGAGACACAGACTAAGGTGTCCAATTGCTGGGGAAATGCTCAAATACCATTTGCACTTCCCTTTAACTTCACCACTTTCCTCTCTCCTCCTCAACTCCACACATCCATCACCACTGCTGCTGACCATTTTTTCAGATTGGTTCGCTCCCTCaacaaaattctctctctcccctctgaATTTCACGCCTTATCCGTGCAGATTCGAAACAACAGGAACGTGAGGTCACTGTCTAGTCATAATTTCGCTGCCGTGTTACCTGGGGATTCGGTGGCGGGGCTAGTGGTGGCTAATGGAGTTCTGAATTTCTTGAACATTTACAACACTTTGCTCATTGTTAGGCTTGTTTTGACATGGTTTCCCAACACTCCTCCTTCCATCGTCAGTCCCCTCAGCACCATATGTGACCCATATCTGAACATATTCCGTGGACTGATTCCCCCTCTCGGAGGAACATTGGATCTCTCTCCCATCCTAGCATTCTTGGTCCTAAATGCCTTCACTAGCACTGCTGCTGCACTCCCTGCTGAGCTTCCAGTCTCAGAACAATCCCAACAAGGTCTTGCTGCACCATTACAATCCACTAATGTTACTACTTCACAGAAGAAATGGATGAGACGGCTTCTAGGGAACAGGTCAAGGACATCCGGTGGTGCCAAATAG 690 0.4638 MGVNANDSSTETQTKVSNCWGNAQIPFALPFNFTTFLSPPQLHTSITTAADHFFRLVRSLNKILSLPSEFHALSVQIRNNRNVRSLSSHNFAAVLPGDSVAGLVVANGVLNFLNIYNTLLIVRLVLTWFPNTPPSIVSPLSTICDPYLNIFRGLIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPVSEQSQQGLAAPLQSTNVTTSQKKWMRRLLGNRSRTSGGAK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3583 229 Pfam YGGT family 112 175 IPR003425 GO:0016020
Ssu1g3583 229 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 42 223 - -
Ssu1g3583 229 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 42 223 IPR003425 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3583 Ssu-Chr1 91163484 91165017 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3583 K02221 - gmx:100802756 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3583 1 91163484 91165017 Ssu1g3583 1 91163484 91165017 ECH