Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3576 ATGGCTCCGTCATTTCTGAGCATCGTGTCGGTGTACGGCGGCTACATCCGACGGTGCTTCGCGGGCGCGGGGCTATCGTCGCAGACGCTGAAGGTGGATGACGAGACCACGGTGCACTTTTGGGGCCCGAGAAACGAAACGGCCCAGAAGCCTTCCGTGGTTCTGATCCACGGGTTTGGGCCTGCGGCCCTCTGGCAGTGGCGTCAGCAGGTCCAGTTCCTGGCCCCTCACTTCAACGTGTACGTTCCGGACCTGATTTTCTTCGGAGGGTCGAGCACGAGGTCGAGCGAGAGAAGCGAGGTGTTTCAAGCAGCGTCGGAGCAACAACGTCGCGTTGATGCAGAGGGCTCAATGGACAAGATTGAGGACCTTATGCTGCCTGCTACGCCCCAACACTTGCGAAAATTGATGTCGCTCTCCATCCACAAGCCTCCCCAAATCTTGCCCGATTTCTTCCTCAGGGACTTCTTAGATAAATTATATGCAGAAAATAGGAAGGAAAAAATGGAGCTTTTGAAAGGGTTAACCATCGGAAAGGATGATACATCAAACATTTCACCTCTTCGACAGTCATACTCAGGAGGTTCTCGTAGTCTGGGGGGAACAAGATCGAATATTTCCTGTGCAATTGGCCCACGAATTAAAAGAGGTAATCAGTAA 660 0.5288 MAPSFLSIVSVYGGYIRRCFAGAGLSSQTLKVDDETTVHFWGPRNETAQKPSVVLIHGFGPAALWQWRQQVQFLAPHFNVYVPDLIFFGGSSTRSSERSEVFQAASEQQRRVDAEGSMDKIEDLMLPATPQHLRKLMSLSIHKPPQILPDFFLRDFLDKLYAENRKEKMELLKGLTIGKDDTSNISPLRQSYSGGSRSLGGTRSNISCAIGPRIKRGNQ 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3576 219 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 115 190 - -
Ssu1g3576 219 MobiDBLite consensus disorder prediction 186 205 - -
Ssu1g3576 219 Gene3D alpha/beta hydrolase 20 125 IPR029058 -
Ssu1g3576 219 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 106 - -
Ssu1g3576 219 PANTHER SI:DKEY-122A22.2 115 190 - -
Ssu1g3576 219 PANTHER SI:DKEY-122A22.2 5 106 - -
Ssu1g3576 219 SUPERFAMILY alpha/beta-Hydrolases 26 98 IPR029058 -
Ssu1g3576 219 MobiDBLite consensus disorder prediction 186 219 - -
Ssu1g3576 219 SUPERFAMILY alpha/beta-Hydrolases 51 190 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3576 Ssu-Chr1 90997523 91005983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3576 49 161 Acyl Lipid Metabolism Gene Families AT3G51000 28.906 7.84e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3576 - - gmx:100812356 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3576 1 90997523 91005983 Ssu1g3576 1 90997523 91005983 ECH