Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3572 ATGCGGCAGAGTTTATTCCTTTTGCCCTCAGATCATCGTTGTCTGGAACTACCTAGCTCAGTAGATGCAACAGCAAGGCTTCCTGCTGCTGGAGCTCTTGGGAAAGCAGTTTTAGATAGATCAGAATCATCCATTTCAAATAATTCTGATGATGAGGTGCACCAATTCTGGCGATGTCAGCTCCCTGATGATATTACCCCTGATTTCAAGGTCATGGGAGAAGATGAGTCCCGAGGTCTTGATGATCTTTCTTTAGCAGGTTTATCCATACATGATGACAGTGAAGCCTCCAGGTTTCCTTCTTCTAAAggaagtaaatatataataaaagagctGGAAGAAATATCCCAACAGCATATTAATGGCAATAGCTTTGCAGATAAATTAAGGCTTTCTTCCAATTCAAGCTACAGGGAGGACCTGTCTTCTCCAAGTTTTTTGAATGCTCTGGCAAAGCCTTGGGAGAGGCCAACTGGGAGTGCTGAGCAGCGTATTAGCGGTGGTCAAGAGGGGCTTACTTATGATGACATCTCTAGACATGGATACTTAAATGATGTTTTGGCTGAAAAAGCAATTGTGGATGATACTGATTTGAATCCTTTGGAGTTTTTAGCTTCCTTGTTCCCTGGTTTTGCTGCAGAAAGCCTTGCAGAAGTTTACTTTGCCAATGGATGTGATTTACATCTGACCACTGAGATGCTCAGTCAGTTAGAGCTTCAAGTTGATGGTGGTTTCAATCAGAATCTGAATTCAAAGACTCTGTCAGCTCCCAATCTCAGTGCAATGGACTTCACCGCACTTACTTCACCAGATGGCCAGACTACTTCAGTAAAATATGTGGTAGATAATGTCCAACAAAGTGGCAATCCTTACCGATCATCTGACAGTGATGTGCTGTTTTTCAAATCTAGCTCTTCAGTTCCATCTAGAGGTGCTATTGACTTTGCTTCAGCTGTTAAGAAGTTGGCTTCTCAGGATTCTGGTGGTATATGGAAGTATGACAAAAATGGCTCTGGTGATGCTGCTATTGGCTCAAGTAGGAGTTCAAATGTTCTGGCTAGTGGCTACAATGGTGGACAGGGGAGAGCACACTTTGGTGATCGGTTGCAGAACCGTGGTTCAGCTCGGGCAGCTCCTGTTTGGCTTGAAACCGGTGATGCAGTTGGTAAATACATATGTTTATATGCTTCAATTGTGGAATGA 1203 0.4264 MRQSLFLLPSDHRCLELPSSVDATARLPAAGALGKAVLDRSESSISNNSDDEVHQFWRCQLPDDITPDFKVMGEDESRGLDDLSLAGLSIHDDSEASRFPSSKGSKYIIKELEEISQQHINGNSFADKLRLSSNSSYREDLSSPSFLNALAKPWERPTGSAEQRISGGQEGLTYDDISRHGYLNDVLAEKAIVDDTDLNPLEFLASLFPGFAAESLAEVYFANGCDLHLTTEMLSQLELQVDGGFNQNLNSKTLSAPNLSAMDFTALTSPDGQTTSVKYVVDNVQQSGNPYRSSDSDVLFFKSSSSVPSRGAIDFASAVKKLASQDSGGIWKYDKNGSGDAAIGSSRSSNVLASGYNGGQGRAHFGDRLQNRGSARAAPVWLETGDAVGKYICLYASIVE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3572 400 CDD CUE_CID7_like 198 240 IPR041806 -
Ssu1g3572 400 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 20 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3572 Ssu-Chr1 90913232 90915280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3572 - - gmx:100814198 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3572 1 90913232 90915280 Ssu1g3572 1 90913232 90915280 ECH