LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu1g3560	atggaATTAGATAAGCTCAATAAGCTTGAAGAACCTCCTCTCTCTGGTGCTTACATCCGTAGCCTAGTGAAACAACTAACCACCTCTAGAACAAACGACTTCATGAACCCAAAAGACCAAGATTGTGTTGTGAATGGTGGTGTTTCCCACGGTCAAAATTCAACAAAGCGTGGCAAAATTGTAGATGCTTGTCAGGCACAGCAGTCCACACAACCCcaacaacataaaaaacaagTTAGGAGGAGACTCCACACCAGTAGGCCTTATCAAGAAAAGCTTTTGAATATGGCAGAGGCTCGGAGGGAGATTGTCACCGCCTTGAAATTTCACAGGGCGGCTATGAAAGAAGCAAGTGAACAGAAGCAGCAGCTGCAACAGCAACAGCAGCAATCTCAGGAACAGCAGCAAAGGCCATCAGTACCCCTCCAGCCATCCCAGTACCCAAGTTTTGACCAAGATGGAAAATTTAAGTCTAGGAGAAACCCCAGAATTTATCCAGCATGCACAACCAATTTGTCAAGTTACACGGATGATTTATCCTATTCATGCTTATCCCAACCTCTTCCTTCAGTTCCAAATTCTTACACCTGGCCTGCTGCTTCCCCAATTACTCCACCACCCCTTATGGCTGAAAACCCCAATTTCACACTTCCAGATCAGACTTTGGGATTGAATCTCAATTTTCAAGATTTCAACAACTTAGATGCTACCTTTCACCTCAATAACTCATCATTATCCTTTTGCTCATCTGCAACCTCGTCTTCTCCACCACAGGAACTTCCTTCCCTTGGAATATCACAGGGAGAGGGGTTTTCTTCGTTGGTGGATACTATTGAATCCAATGCTGCAACCCAGGTTACTGGAGGCTTACACACAGCCATGGACGATGAGGGTATGGCAGAGATCAGATCATTAGGAGAGCAATACCAAATGGAATGGAATGACACCATGAATTTGGTCAAATCAGCTTGTTGGTTCAACTTCTTGAAAAACATGGAGCATAGAACACCAGAAGCCAAGACCGAAGATGATGCATGCCATAATTTTGACCAACTTCTGGAGTTTCCAGCTTGGTTGAATGCAAACGAGAGCTGCTTAGAGCAGTGCTCGGAGGATTATTTCCAAGATTCTTCCTTGCCTTGGTTGAACTTGCTAAACTTGGTTATGGAGCACAAGTCAAAAGCCAAAATTcttgtagttttattttttttatttttttggtgtatgtgtgtgtgtcaatCTCCATATTCATTTTTGAGTTTgatattgattttgattcttttgaaaTAA	1290	0.407	MELDKLNKLEEPPLSGAYIRSLVKQLTTSRTNDFMNPKDQDCVVNGGVSHGQNSTKRGKIVDACQAQQSTQPQQHKKQVRRRLHTSRPYQEKLLNMAEARREIVTALKFHRAAMKEASEQKQQLQQQQQQSQEQQQRPSVPLQPSQYPSFDQDGKFKSRRNPRIYPACTTNLSSYTDDLSYSCLSQPLPSVPNSYTWPAASPITPPPLMAENPNFTLPDQTLGLNLNFQDFNNLDATFHLNNSSLSFCSSATSSSPPQELPSLGISQGEGFSSLVDTIESNAATQVTGGLHTAMDDEGMAEIRSLGEQYQMEWNDTMNLVKSACWFNFLKNMEHRTPEAKTEDDACHNFDQLLEFPAWLNANESCLEQCSEDYFQDSSLPWLNLLNLVMEHKSKAKILVVLFFLFFWCMCVCQSPYSFLSLILILILLK	429

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu1g3560	429	PANTHER	E1A-BINDING PROTEIN P400-LIKE	1	384	-	-
	Ssu1g3560	429	MobiDBLite	consensus disorder prediction	66	92	-	-
	Ssu1g3560	429	PANTHER	E1A-BINDING PROTEIN P400-LIKE	1	384	-	-
	Ssu1g3560	429	Coils	Coil	107	137	-	-
	Ssu1g3560	429	MobiDBLite	consensus disorder prediction	118	152	-	-
	Ssu1g3560	429	MobiDBLite	consensus disorder prediction	114	162	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu1g3560	Ssu-Chr1	90640049	90641748	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu1g3560	-		-	gmx:100808969	607.831

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu1g3560	1	90640049	90641748	Ssu1g3560	1	90640049	90641748	ECH