Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3555 ATGCCGCGTCcccaaacaaatgaaaaactaaacaaGATCGGACCAATTCCAAGTAGAATTCTTCCTGTCAAGTTAAGTGGCGATTCAACAAATCTATCAGTAAAATCAGTTATTGCAGTTAGATTGTTGATAGACAGCAAGATAAACATAAATGCCAAGAATTTAGAGGACTCAACAGCGTTGGACATAGTGGAGATCAATGAGACTCAGGCTCACAGCGCAGAGATCAGAGACACGTTAGTAAGAGGAGGAGCTTTACGTGGTTTTTCACTTGCTACTGCTCCACTCCTAGAAGAAGAGCTAAGAGCGAAAATCACGTTCAACGAGAGAATAGCAATCTTCGTTAGTCGCCTCAGAAAGAGAATATCAAACGACACACGCAATGCCTTGTTGGTAGTTGCTATTCTTTTCGCAACAAGCACGTACGATGCAGTACTTGATCCCCCCGGTGGAGTTTACCAAGGTGAGAGCAGTGCCGCACCCTCTATGAATTATAGCGCATCACTGGGGCATAGGGATAATGCAACGCGAGAAATTGTCGGCAAAGTGGTGATGAAAATACAGACCTTCTTTTGGTTCTGGTGCTTCAATTCATGGTCCTTTTATCTATCAATTATGATGATATGTTTGCTAATGCCTAGAGGGCGCATCAGCGTTATAGTCACTTTTCCGCTTTCTATCTTTTCTGGGTGCTACGTGTTCTCCATGGTAGTGATATCACCCAGCCTCAAGTTGAGCACTGCCACTATGGTTCTGCCATGCGTATTTATCGTACTGTACTGTTGGGGAAGTTCGATATACATTAGATTAgccaaaaaacttaaaatgtaCGGTCATAAACAGAAAGACACGTTCAAGTTTTCAGGAGGAAATAGAtggtaa 882 0.4093 MPRPQTNEKLNKIGPIPSRILPVKLSGDSTNLSVKSVIAVRLLIDSKININAKNLEDSTALDIVEINETQAHSAEIRDTLVRGGALRGFSLATAPLLEEELRAKITFNERIAIFVSRLRKRISNDTRNALLVVAILFATSTYDAVLDPPGGVYQGESSAAPSMNYSASLGHRDNATREIVGKVVMKIQTFFWFWCFNSWSFYLSIMMICLLMPRGRISVIVTFPLSIFSGCYVFSMVVISPSLKLSTATMVLPCVFIVLYCWGSSIYIRLAKKLKMYGHKQKDTFKFSGGNRW 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3555 293 Pfam Domain of unknown function 124 217 IPR026961 -
Ssu1g3555 293 PANTHER ANKYRIN REPEAT PROTEIN 33 259 - -
Ssu1g3555 293 PANTHER HOMEOBOX PROTEIN WARIAI 33 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3555 Ssu-Chr1 90510721 90513609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3555 39 267 Miscellaneous Gene Families AT5G15500 31.169 1.08e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3555 - - gmx:100790227 408.297