Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3554 ATGAGGACACTGGTTTCGCGCTTGATCCATTCCACGCCTTCTATTTCCAGGCTCAGTGCAACGGCAATTTCAATCAACGGGAGAAATCTCTCCACAGATTCTAACAAAGTTGATGAGCCCTTTAAAGTTGAAGAAGCAGAGACTGTAAATGTGCCCCCACCCCCAACAGAAAAGTTGCTTGTGTTGGGAGGCAATGGATTTGTCGGATCACACATTTGTCGAGAAGCCTTAGAACGTGGCTTATCTGTTGCGAGTCTTAGCAGGTCTGGTAGGTCATCCCTACATGATTCCTGGGCTAGCAATGTTGCTTGGTATAAAGGGAATCTCCTTTCAACTGATTCATTGAAAGAAGCCCTGAATGGGGTCACTGCTGTTATCTCATGTGTTGGTGGTTTTGGCTCCAACTCGTACATGTACAAAATTAATGGGACTGCTAACATCAATGCAATTAGAGCAGCTTCTGATCAAGGTGTTAAAAGATTTGTCTATATCTCTGCTGCTGACTTTGGTGTAGTCAATTACTTACTGCAGGGGTATTATGAAGGAAAGAAAGCTGCTGAAACAGAGCTCCTGACCAGATTTCCATATGGAGGAGTAATTCTGAGGCCTGGATTTATCTATGGGACTCGAAGTGTTGGGAGCATGAAGATACCCCTTGGTGTAATTGGATCTCCATTGGAAAAGGTTCTCCAACTTGCGAAACCATTGAGCCAGATCCCACTTGTTGGACCTCTATTGACACCTCCTGTCAATGTTACTGCGGTGGCAAAAGTTGCTGTTAGAGCTGCTACTGATCCTGTTTTTCCCCCGGGGATCATAGATGTTTATGGAATACAACGTTACAGTCAGCATAAATCAAACTAG 864 0.4444 MRTLVSRLIHSTPSISRLSATAISINGRNLSTDSNKVDEPFKVEEAETVNVPPPPTEKLLVLGGNGFVGSHICREALERGLSVASLSRSGRSSLHDSWASNVAWYKGNLLSTDSLKEALNGVTAVISCVGGFGSNSYMYKINGTANINAIRAASDQGVKRFVYISAADFGVVNYLLQGYYEGKKAAETELLTRFPYGGVILRPGFIYGTRSVGSMKIPLGVIGSPLEKVLQLAKPLSQIPLVGPLLTPPVNVTAVAKVAVRAATDPVFPPGIIDVYGIQRYSQHKSN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3554 287 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED 16 285 - -
Ssu1g3554 287 Pfam NAD(P)H-binding 63 206 IPR016040 -
Ssu1g3554 287 Gene3D - 50 276 - -
Ssu1g3554 287 PANTHER BNAANNG24990D PROTEIN 16 285 - -
Ssu1g3554 287 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 58 277 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3554 Ssu-Chr1 90503911 90510233 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3554 - - gmx:100791278 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3554 1 90503911 90510233 Ssu1g3554 1 90503911 90510233 ECH