Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3540 ATGGAGCTGACACCCCAGCAGCTGAGCCAATACAACGGCACGGACTCGTCGAAGCCGATCTACGTGGCGGTGAAGGGGCGCGTGTACGACGTCACCACCGGCAAATCGTTCTACGGCCCCGGCGGGGCCTACGCCATGTTCGCCGGCAAAGACGCCAGCAGAGCCCTCGCCAAGATGAGCAAGAACGACGACGACATCTCCCCCTCCCTCGACGGCCTCTCCGACAAGGAGATCGGAGTCCTCAACGATTGGGAGAACAAATTCCAAGCTAAGTACCCTGTCGTTGGCCACAGCAACTGTGACCATTCTGAATGTGGAGTGGAGAACCATAATTGCCAAAATCAAGGTCGTGAGCAATACAAGATCAACGGCCAAGGGCTACTCATATCCATGCTGCACATCACCAAGCTCATTTCCCGGCTGATGCAAGAAAGAGCGGCTCGCTCAAGTTCCATGATCGCAGAATAG 468 0.562 MELTPQQLSQYNGTDSSKPIYVAVKGRVYDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDDDISPSLDGLSDKEIGVLNDWENKFQAKYPVVGHSNCDHSECGVENHNCQNQGREQYKINGQGLLISMLHITKLISRLMQERAARSSSMIAE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3540 155 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 2 97 IPR036400 -
Ssu1g3540 155 PANTHER CALCUTTA CUP-RELATED 2 97 - -
Ssu1g3540 155 Pfam Cytochrome b5-like Heme/Steroid binding domain 4 86 IPR001199 -
Ssu1g3540 155 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 2 97 - -
Ssu1g3540 155 Gene3D - 1 98 IPR036400 -
Ssu1g3540 155 SMART Cyt_b5_2 3 99 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3540 Ssu-Chr1 90304079 90305100 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3540 K17278 - gmx:100813061 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3540 1 90304079 90305100 Ssu1g3540 1 90304079 90305100 ECH