Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3539 ATGTATTTGAATATAGAGCCCAAAGCCCATCACATTATTGCTGGTATAGCCAAACAAAGAGTGTTGGGGCATCCCTTATCCCGGATTAGGGTTAAGCTTTCAACATTGCGCAAACTTGGACTCAGCCTCTCTCAGTTGAGTCACACACCATCACCACCGGTGATGGAATGGGAGGCACATCCGCATGCACGAACATATAGGTCGAAAACTTTGCCAAACTATTGCGATTTAGAATTAATATTCAGAAATGTGTCTGAAAATGAGATCTGCAATTTGCATCAGGAGAAAAATCAGGAAGATGCCATGTCAGAAACAAAGGCTGCAAATTCTGAGGATCACCCAGATGCAATCTCatataaaaacaattgtttGTATCTTTTCCATGATTTGTGCAAGATTTTCGGAAACAAAGTAATGGAAGTATCAGATACAAGAGTGAGTGATCTGGAGCAGCTTCACTTGATGGAAACAAATGATTTTACCATTGAAATGGATATGGATGGAACACCTGAAAATTTGGGTCTGATTAGCAATATTGACATATCAGACCAGGATCCAGGCAGGGCAAGGGAAATGGATATGGATGGATCATTTGGGAATTTGGTTGTGAGTGGCAGCAATGAAATTGACATCATTATTGGTATTGGAACATCTGGAAATTTAAATGTGACCAGTAACAATGAAATATCAAACCAAGATATAGAAAGGCCAAGGGAAATGGATATGGATATGACATCTGGTAATTTGGATGGGACTGGCGACGGTCAAATATTTTCTCGAGATAGACAAAGCCCCAACGAAATGGCTACAAATGGAACATGTGGGAATTTGGTGATGAGCAGCAACACTAAAATGACACACCATGTCAGAAAAAGGCCTAGTACGATGTCACGAGACTCCAGACCTCCCAAAAAGGAGCTGCGAATGAAAGACGCTTTGTCTGAGATGGCTAGTGCTGTCAAGGCACTGATgaataagaaagagaagaacAATACATCATTTGAAGATGCTTTAAGTGCACTTCAAGCTATGCCGGACATAGATGAGGAGCTAGTAATGGATGCGTGTGATCTGTTGGAAGATGAGACGAAGGCAAAGATATTTTTAGCTTTGGATATCTCTTTGCGAAAGAAGTGGTTGCTTAGAAAGCTTCGTCAGTAA 1161 0.4005 MYLNIEPKAHHIIAGIAKQRVLGHPLSRIRVKLSTLRKLGLSLSQLSHTPSPPVMEWEAHPHARTYRSKTLPNYCDLELIFRNVSENEICNLHQEKNQEDAMSETKAANSEDHPDAISYKNNCLYLFHDLCKIFGNKVMEVSDTRVSDLEQLHLMETNDFTIEMDMDGTPENLGLISNIDISDQDPGRAREMDMDGSFGNLVVSGSNEIDIIIGIGTSGNLNVTSNNEISNQDIERPREMDMDMTSGNLDGTGDGQIFSRDRQSPNEMATNGTCGNLVMSSNTKMTHHVRKRPSTMSRDSRPPKKELRMKDALSEMASAVKALMNKKEKNNTSFEDALSALQAMPDIDEELVMDACDLLEDETKAKIFLALDISLRKKWLLRKLRQ 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3539 386 MobiDBLite consensus disorder prediction 285 305 - -
Ssu1g3539 386 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 59 85 - -
Ssu1g3539 386 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 261 386 - -
Ssu1g3539 386 Coils Coil 324 344 - -
Ssu1g3539 386 PANTHER EXPRESSED PROTEIN 261 386 - -
Ssu1g3539 386 PANTHER EXPRESSED PROTEIN 59 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3539 Ssu-Chr1 90292317 90297435 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3539 - - aprc:113865140 389.037