Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3501 ATGGGCGTTGCCGTTCTTCATCCCCAGGATTCCGTCAGAAACAAACCACCTAATCATTACCAAACCATAATCTCTCACTTTCCCAACATAAAATTCTCCAACCCCAACCCTAAGTCTCATCGGAGTTCCCGAAATCGCAAGAAGCGGGGCGACTCAAGCCCACAAGATGTTTACGTTTCCGACCCGGCCCGGCCCGCATCCTCCAACCCCCAAGTCAACAATAAGCAGCTCGTCAGGGGTCAGGTCAAAATCCTAAAACGCGGCGAGCAGCTGGCCGAAACGACGCCGGATCGGCAACCGCAGACGGAATCCGTAGGGCCGACGTTAACTTTGACGGAGAAAGTGGAGGGATTGTATGCGGGGTATTCGATGTTGGTGATGTCGCCGCCTCCCAGCTCCGTTCCGTTACCGGTTTTTATTACTAAGAAGTTCGCGGCTGTGAGTGACGCCACGAGTGacttaagaaaaatgttacGGCTTGATTTTCCCTAA 492 0.5163 MGVAVLHPQDSVRNKPPNHYQTIISHFPNIKFSNPNPKSHRSSRNRKKRGDSSPQDVYVSDPARPASSNPQVNNKQLVRGQVKILKRGEQLAETTPDRQPQTESVGPTLTLTEKVEGLYAGYSMLVMSPPPSSVPLPVFITKKFAAVSDATSDLRKMLRLDFP 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3501 163 MobiDBLite consensus disorder prediction 62 78 - -
Ssu1g3501 163 PANTHER BNAA03G51870D PROTEIN 1 162 - -
Ssu1g3501 163 PANTHER SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE 1 162 - -
Ssu1g3501 163 MobiDBLite consensus disorder prediction 26 78 - -
Ssu1g3501 163 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3501 Ssu-Chr1 89510888 89511379 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3501 - - vra:106761031 184.496