Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3491 ATGAATGCTCTCACAACGACAGAGAAGCTTAAAGCTGAGTACCTCAGCAAAGCAAGCGTTGAGTATGAGACCAAgGTACAAGAGGCAAATTGGGAGTTGTACAAGAAGCAAAAACCGGCAAAAGCAATATTGTTTGAGAAGGAGAAAGAGATTGCCAAGACTAATGCCGATGCAATCCGTGGACTTCAGCCAAAGATTAGTATTTGGACTAATGGTGGGGAAGCAAATGATGGCAGTGGTGGCATGAAGGATGTTGTTGGTGTCTACAAGATGTTGCCACCTTTATTAAAGACAGTCCACGAGCAAACGGGCATGCTGCCCCCGACTTGGATGGGAACTTGCCTGACAAAAATTCTTAAGCCTTTTTTGAAATTTGATCAATTGAAAAAGGAAGGTTTCAAATGTAAAGTTGATGAACAAGATGACAAGGAGCAAGTCCTTGCTTTAAATGTTGCGCAAAAGTTGGATTTACTACATTTACATGAGACTGTTGAAAAAATGTACCATGACTTAAATGCAGTAAGTGTTAAGGTTGAAAAAATTAGCCATGACTTGAATATGGCAAGTAGAATGGTCGAAACAATGAACCAGGAGTTAAATGTCATAAATAAGAAGCTTGATTTGCGGtatgaagatttttaa 642 0.3894 MNALTTTEKLKAEYLSKASVEYETKVQEANWELYKKQKPAKAILFEKEKEIAKTNADAIRGLQPKISIWTNGGEANDGSGGMKDVVGVYKMLPPLLKTVHEQTGMLPPTWMGTCLTKILKPFLKFDQLKKEGFKCKVDEQDDKEQVLALNVAQKLDLLHLHETVEKMYHDLNAVSVKVEKISHDLNMASRMVETMNQELNVINKKLDLRYEDF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3491 213 PANTHER FLOTILLIN-LIKE PROTEIN 3 49 114 - -
Ssu1g3491 213 PANTHER FLOTILLIN-LIKE PROTEIN 3 1 50 - -
Ssu1g3491 213 PANTHER FLOTILLIN-RELATED 49 114 IPR027705 -
Ssu1g3491 213 PANTHER FLOTILLIN-RELATED 1 50 IPR027705 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3491 Ssu-Chr1 89263881 89266721 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3491 K07192 - gmx:547522 162.925