Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3478 ATGGCCTCCACCAGATcactcattctttttcttttcattcaattGTGCTTCTCACATCTACCTTTCTCATTCGCGCAATCCCCTGCCCCTGGGTCTGCCGAAGGATACACCATTTACGGTCGAGTGAAGATCCCCAGTGTGGGAACAAAAGAATATATTCTTCCTGGAAAAATTTCAAATGTCAAAGTCATACTCAATGGTGGTCAAAGAGTTACCTTTCTGAGGCCCGATGGATATTTCTCGTTCCACAATGTTTCTGCAGGTACACATCTAATTGAAGTGGCTGCAATAGGCTATTTCTTTTCTCCGGTACGAGTTGATGTAAGTGCCAGACATCATGGCAAAATTCAGGCAGCACTGACAGAAAATAGGAGGGGGCTTACTGAGTTTGTCTTAGAGCCGTTAAAGGAAGAACAATATTATGAGGTTAGGGAGCCATTCTCTATTATGTCCATTGTGAAAAGTCCAATGGGTCTGATGGTGGGATTTATGCTGATTGTTGTCTTCCTCATGCCCAAATTAATGGAGAACATGGATCCAGAAGAAATGAGGCGTGCACAAGAAGAAATGAGAAATCAAGGAGTTCCATCTTTAGCAAGCCTGTTACCTGGTGCTGCAAGAAGCAACTAG 630 0.4206 MASTRSLILFLFIQLCFSHLPFSFAQSPAPGSAEGYTIYGRVKIPSVGTKEYILPGKISNVKVILNGGQRVTFLRPDGYFSFHNVSAGTHLIEVAAIGYFFSPVRVDVSARHHGKIQAALTENRRGLTEFVLEPLKEEQYYEVREPFSIMSIVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRNQGVPSLASLLPGAARSN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3478 209 PANTHER UNCHARACTERIZED 21 209 IPR039163 -
Ssu1g3478 209 Pfam ER membrane protein complex subunit 7, beta-sandwich domain 58 160 IPR019008 -
Ssu1g3478 209 PANTHER ER MEMBRANE PROTEIN COMPLEX SUBUNIT 7 HOMOLOG 21 209 - -
Ssu1g3478 209 SUPERFAMILY Starch-binding domain-like 33 112 IPR013784 GO:0030246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3478 K23568 - gmx:100816780 389.808