Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3464 ATGGCTCCGACGACGATCCGGAAGGCGATTGGGGTGGTGAAGGACCAGACGAGCATAGGGATTGCGAAGGTGGCGAGCAACATGGCGCCGGAGATGGAGGTGGCGATCGTGAAGGCGACGAGCCACGACGACGACCCCGCGGGCGAGAAGTACGTGAGGGAGATCTTGAACCTCATGTCCCACTCGCGCGGCTACGTCCAAGCGGGCGTCTCGGCGGTGTCGAAGCGCTTGGGGAAGACGCGCGACTGGATTGTGGCGCTCAAGGCGCTCATGCTCGTGCACAGGCTCATGAACGAGGGCCCCCCGCTGTTCCAGGAGGAGATCCTCTACGCCACCCGCAGAGGAACCAGGCTCCTCAACATGTCCGATTTCAGAGACGAGGCTCACTCTAGCTCGTGGGACCACTCCGCTTTCGTGAGGACCTATGCTATGTATCTCGATCAGAGGCTCGAGCTGACGCTGTTTGATAGAAAAAGTGCCGGTGGCAgtgttggtggtggtagtggcggcGCTGCGGATGATAGGTTTGGCGGGAGAGACAGTTTCGGCGGGAGAGACAATTTCCGGTCGCCGCCGTATGAGTACGGTGGTGGGGAGTTTAGAGGGGAAGGAGGGTATGGGAATGGGATGAGGAGGACGAGGTCGTTTGGGGACATGAGTGAATCGGTGGGGAGGGGGCAGGAGAAGAGGGTTGTGAGTGTGACTCCTGTGAGGGATATGACGCCGGAGAGGATTTTCGGCAAGATGGGTCATTTGCAGAGGTTGTTGGATCGGTTCTTGGCTTGTAGGCCTACTGGGTTGGCTAAGAGTAGTAGGATGGTTTTGATTGCGTTGTATCCGGTGGTTAAGGAGAGTTTTCAGTTGTATGCTGATATCTGTGATGTTTTGGCTGTGTTGCTTGATAAGTTCTTTGATATGGAGTATCCTGATTGTGTGAAGGCCTTCGATGCTTATGCCAGTGCGGCTAAGCAGATTGATGAGTTGGTTGCTTTTTATAATTGGTGTAAGGATACCGGCGTGGCGAGGTCCTCGGAGTATCCGGAAGTTCAGAGGATTACCAGCAAGTTGCTTGAGACATTGGAGGAGTTTGTGAGGGATAGGGCCAAGAGGCCCAAGAGTCCGGAGAGGAAGGAGGAGGCTCCTGTGGTGGAAAAGGTGGAGGAGGAGCCGGTGCCGGATATGAATGAGATCAAGGCACTGCCTCCACCGGAGAATTACACCCCGCCTCCTCCGCCTGAGCCGGAGCCTAAGCTGCAGCCGCAGGTTATGGAGGACTTGGTGAATCTGAGAGATGATGCTGTCACTGCGGATGACCAGGGGAATAAATTGGCTTTGGCACTCTTTGCTGGTGCACCGGCTAATAATGCAAATGGATCATGGGAAGCCTTCCCGTCAAATGGACAGCCAGAGGTGACTTCAGCCTGGCAAACCCCGGCCGCAGAGCCTGGGAAAGCCGATTGGGAATTGGCATTGGTAGAGACTGCTAGCAATTTGTCAAAGCAGAAGGCAGCTTTAGGTGGTGGGTTTGATCCGCTATTGTTGACTGGCATGTATGATCAAGGAATGGTGAGGCAGCATGTTAGCACTACCCAACTGAGTGGAGGGAGTGCAAGCAGTGTGGCATTGCCAGGACCGGGAAAGACTACAACCCCTGTTTTGGCTCTCCCGGCCCCAGATGGATCTGTGCAGCCAGTTAATCAGGATCCATTTGCTGCATCATTGAGCATTCCACCACCATCCTATGTGCAAATGGCCGATATGGAGAAGAAACAGCAGTTGCTTGTGCAGGAGCAGCAGGTGTGGCATCAGTATGCAAGGGATGGGATGCAAGGCCAATCTAGCTTGGCCAAACTGAGTGGCACTGGATACTATGCTGGAGGTCCTATGCCCATGAATGTGATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCTCCAACCGGGTATTATCATACTCCTTACTGA 1968 0.5396 MAPTTIRKAIGVVKDQTSIGIAKVASNMAPEMEVAIVKATSHDDDPAGEKYVREILNLMSHSRGYVQAGVSAVSKRLGKTRDWIVALKALMLVHRLMNEGPPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELTLFDRKSAGGSVGGGSGGAADDRFGGRDSFGGRDNFRSPPYEYGGGEFRGEGGYGNGMRRTRSFGDMSESVGRGQEKRVVSVTPVRDMTPERIFGKMGHLQRLLDRFLACRPTGLAKSSRMVLIALYPVVKESFQLYADICDVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEAPVVEKVEEEPVPDMNEIKALPPPENYTPPPPPEPEPKLQPQVMEDLVNLRDDAVTADDQGNKLALALFAGAPANNANGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKAALGGGFDPLLLTGMYDQGMVRQHVSTTQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLSIPPPSYVQMADMEKKQQLLVQEQQVWHQYARDGMQGQSSLAKLSGTGYYAGGPMPMNVMPYGMPPVNGMGPPTGYYHTPY 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3464 655 MobiDBLite consensus disorder prediction 402 418 - -
Ssu1g3464 655 Gene3D - 2 156 IPR008942 -
Ssu1g3464 655 MobiDBLite consensus disorder prediction 367 418 - -
Ssu1g3464 655 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Ssu1g3464 655 CDD ANTH_N_AP180_plant 33 152 - -
Ssu1g3464 655 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 629 IPR045192 GO:0048268|GO:0072583
Ssu1g3464 655 MobiDBLite consensus disorder prediction 367 394 - -
Ssu1g3464 655 PANTHER - 5 629 - -
Ssu1g3464 655 Pfam ANTH domain 32 152 IPR011417 GO:0005543
Ssu1g3464 655 Pfam ANTH domain 224 366 IPR011417 GO:0005543
Ssu1g3464 655 Gene3D ANTH domain 228 378 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Ssu1g3464 655 SUPERFAMILY GAT-like domain 236 366 - -
Ssu1g3464 655 SMART enth_2 30 160 IPR013809 -
Ssu1g3464 655 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3464 Ssu-Chr1 88873960 88875927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3464 - - gmx:100803282 1126.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3464 1 88873960 88875927 Ssu1g3464 1 88873960 88875927 ECH