Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3463 ATGCCAAGGCCAGGTCCGAGGCCTTACGATTGCGTGAGAAGAGCTTGGCACAGTGAAATACACCAACCCATCAGAGGAACTCTAATTCAAGAAATTTTCAGGGTCGTCAACGAGATACATGGCTCTTCTATTAAGAAGAACAAAGAGTACCAAGAGAAGCTACCAGTTGTTGTGCTCAGGGCAGAGGAAATTATTTACTCTAAAGCCAATTCCGAGGCCGAATACATGGACCTTACAACACTTTTGGATAGAACAAATGATGCCATTAATACAATAATTCGACGTGATGAGCATACAGAAACTGGAGAGTATTTGCGGCCTTGCATCGAAGCTGCTCTGAGTTTGGGTTGCTCCCTAACAAAAACTTCAAGGAGTCAACGCAACAACCAAAGATGTTATTTGAGTCGCAGCACCGAAGAGGTTCCCAATCTTTCTCACAACACGGTGCATAACGCTACTAGAAAGGATCATAACACAAAGTCTCAATATGTGTCCGAGAATGTGCCTTCAGCTAGTAAAAAGCAGTGCGTGGAACATCATCCGCCACCAAAATCGTTTTCAGTGTATCCTCTGTACTATGGGAGCAACATCCAACTTGACGCGTCCCAACATGGGTTTAAAGTATCACATGTTTCTGTTTCTCACGCTGGTGGGCCAGCCCTTGTGGGTGGTGCTCAGAATCTACTAGCCCATAACTTCAATTCTTCAAGTGGGGGATCCCAATCGTTCACTATTAATGGGAATTTTGAGAATCAATGCACAAACAAATGTGATCTATCCTTGAGGTTAGGACCCCTTATGCCAGCCCCTAGTTATTATGGAAATGGTCAGATTCAGGAAACTGAAGTGAGAAGCAAGTTAATTGTTCGAACCCCCCAGAAGGCTAAAAAGTTGGAGCTTCAAGGACAATTATGTGAGAGTGCAACCAACAACAGTACAATAACCGAACGCAGATTTTAG 960 0.4385 MPRPGPRPYDCVRRAWHSEIHQPIRGTLIQEIFRVVNEIHGSSIKKNKEYQEKLPVVVLRAEEIIYSKANSEAEYMDLTTLLDRTNDAINTIIRRDEHTETGEYLRPCIEAALSLGCSLTKTSRSQRNNQRCYLSRSTEEVPNLSHNTVHNATRKDHNTKSQYVSENVPSASKKQCVEHHPPPKSFSVYPLYYGSNIQLDASQHGFKVSHVSVSHAGGPALVGGAQNLLAHNFNSSSGGSQSFTINGNFENQCTNKCDLSLRLGPLMPAPSYYGNGQIQETEVRSKLIVRTPQKAKKLELQGQLCESATNNSTITERRF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3463 319 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 157 284 - -
Ssu1g3463 319 PANTHER HISTONE ACETYLTRANSFERASE 1 165 - -
Ssu1g3463 319 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 1 165 - -
Ssu1g3463 319 Gene3D Coactivator CBP, KIX domain 11 91 IPR036529 GO:0003712|GO:0006355
Ssu1g3463 319 PANTHER HISTONE ACETYLTRANSFERASE 157 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3463 Ssu-Chr1 88856030 88858475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3463 - - ccaj:109817679 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3463 1 88856030 88858475 Ssu1g3463 1 88856030 88858475 ECH