Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3452 ATGAAGTTCTGGAAGATCCTGAAGAGCCAAATCGAGCAGACCCTGCCCGAGTGGCATGACCAGTTCTTGTCCTACAAAGACTTGAAGAAACAGTTGAAGGTTATGTGTCCCAAAGACGCTCTCACTCCACCCCGTTTGGATGCTGACGAGCTCAACCATTTCCTTCGCCTCTTGGAGCTCGAGATCGATAAGTTTAACGCTTTCTTTGTTGACAAGGAAGAAGAATATATCATCAAATGGAAGGAGTTGCAAGACAGAGTTGCCAGAGCCATGGATTCAAACGTGGAGTTGATGTCACTAGGGAGAGAAATAGTGGATTTTCACGGGGAGATGGTTTTGTTAGAGAACTATACCGCACTCAACTACACAGGTCTAGTgaagataataaagaaatatgataAGCGAACTGGTGCACTACTTCGCTTGCCTTTTATCCAAAAAGTGCTGAACCAGCCCTTCTTCAAAATTGATGTGCTTAACAAGCTTGTAAAGGAGTGCGAGGTGATACTGAGTATTCTTTTCACCAATGATTGGCCTTCAATTAGTGAGGATTTTGAGGAAGATGATTGTGGCTCCGTGACTGGAAATGAAAACAAAGAGACGCTGATGCATGTTCCCAAAGAACTTGCTGAAATTGAAAATATGGAGAACACGTTCACCAGACTAACTTTGTCAGCGCTGCGTAGCTTGGAAGAAATTAGGGGTAGAAGCTCAACTGTAAGCATTTTCTCACTGCCTCCTCTGCATAACTAG 753 0.4303 MKFWKILKSQIEQTLPEWHDQFLSYKDLKKQLKVMCPKDALTPPRLDADELNHFLRLLELEIDKFNAFFVDKEEEYIIKWKELQDRVARAMDSNVELMSLGREIVDFHGEMVLLENYTALNYTGLVKIIKKYDKRTGALLRLPFIQKVLNQPFFKIDVLNKLVKECEVILSILFTNDWPSISEDFEEDDCGSVTGNENKETLMHVPKELAEIENMENTFTRLTLSALRSLEEIRGRSSTVSIFSLPPLHN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3452 250 Pfam SPX domain 102 148 IPR004331 -
Ssu1g3452 250 CDD SPX_AtSPX1_like 2 135 - -
Ssu1g3452 250 ProSiteProfiles SPX domain profile. 1 146 IPR004331 -
Ssu1g3452 250 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 249 IPR031142 GO:0016036
Ssu1g3452 250 PANTHER SPX DOMAIN-CONTAINING PROTEIN 1 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3452 Ssu-Chr1 88635246 88636606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3452 - - gmx:100499977 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3452 1 88635246 88636606 Ssu1g3452 1 88635246 88636606 ECH