Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3451 ATGCTAAGCTATCTCTCTATTCAAACTTTAGGATGCTTAGGTGTTGGTATAGAAAGCCATACAAATCCAAAGCATATTGGAGTCAATTATGTGTTTCAAGGCCCTCTTACTACCAAATATCGCTTTGTCATTGCAAAGGCTGCACAAGGCAACCGAAACACAAAACCGAATAGTGTGATTTGTGCTGACTGTGATGGAAACGGAGCTGTTCTCTGCTCTCAATGCAAAGGCAGCGGGGTGAACGATGTTGATATTTTCAACGGGACAGTTTAA 273 0.4176 MLSYLSIQTLGCLGVGIESHTNPKHIGVNYVFQGPLTTKYRFVIAKAAQGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNDVDIFNGTV 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3451 90 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 19 88 - -
Ssu1g3451 90 PANTHER PROTEIN BUNDLE SHEATH DEFECTIVE 2, CHLOROPLASTIC 19 88 - -
Ssu1g3451 90 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 56 81 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3451 Ssu-Chr1 88633434 88634177 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3451 - - gmx:100306315 130.568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3451 1 88633434 88634177 Ssu1g3451 1 88633434 88634177 ECH