Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3448 ATGGGAAAAGGTGGATCTCTGAGCGACGGCGTGGTGAAGAAGATCGTGCTGTCGTACACGTACGTGGCCATATGGATCTTTCTGAGCTTCACGGTGATCGTGTACAACAAGTACATTCTGGACAAGAAGATGTACAACTGGCCGTTCCCGATCTCCCTGACCATGATCCACATGTCGTTCTGCGCCACCCTGGCCGTCCTCCTGGTCCGGGTGTTCCGCGTCGTGGAGCCCGTCTCCATGTCCCGCGAGGTCTACCTCTCCTCCGTCGTCCCCATCGGCGCCCTCTACTCCCTCTCCCTCTGGCTCTCCAACTCCGCCTACATCTACCTCTCCGTCTCCTTCATCCAGATGCTCAAGGCCCTCATGCCCGTCGCCGTCTACTCCATCGGCGTCCTCCTCAGGAAGGACTCCTACAGGAACGACACCATGCTCAACATGCTCTCCATCTCCCTCGGCGTCGCCGTCGCCGCCTACGGCGAGGCCCGCTTCGACACCTGGGGCGTCCTCCTCCAGCTCGGCGCCGTCGCCTTCGAGGCCACCAGGCTCGTCATGATCCAAATCTTGCTCACCTCCAAAGGGATCTCCCTCAACCCCATCACCTCCCTCTACTACGTCGCCCCTTGCtgcctcctcttcctctccgtGCCCTGGATCTTCGTCGAGTACCCTGTCCTCAAGGACTCTTCCAGTTTTCGCTTCGATTTCGTCGTCTTCGGGACCAATTCCCTCTGCGCCTTCGCGTTGAATCTCGCCGTGTTTCTTCTGGTCGGGAAGACCTCCGCGTTGACCATGAATGTCGCCGGGGTGGTTAAGGATTGGCTGCTCATTGCCTTCTCTTGGTCGGTTATTAAGGACACCGTGACGCCCATTAATTTGTTCGGCTACGGCCTTGCCTTCCTTGGCGTCGCCTATTATAATCATTCCAAGTTGCAGGCGCTGAAGGCCAAGGAGGCGCAGAAGAAGACCGCGCAGGCGGACGAGGAGGAAGGGCGGTTGCTCGAGGACAGAGACGGGGATGGAATGGGCAAGAGGAACGACCAGCAGAATTGA 1050 0.5762 MGKGGSLSDGVVKKIVLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAVLLVRVFRVVEPVSMSREVYLSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLRKDSYRNDTMLNMLSISLGVAVAAYGEARFDTWGVLLQLGAVAFEATRLVMIQILLTSKGISLNPITSLYYVAPCCLLFLSVPWIFVEYPVLKDSSSFRFDFVVFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQALKAKEAQKKTAQADEEEGRLLEDRDGDGMGKRNDQQN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3448 349 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 1 339 - -
Ssu1g3448 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 63 160 - -
Ssu1g3448 349 MobiDBLite consensus disorder prediction 321 349 - -
Ssu1g3448 349 Pfam Triose-phosphate Transporter family 20 306 IPR004853 -
Ssu1g3448 349 PANTHER SOLUTE CARRIER FAMILY 35 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3448 Ssu-Chr1 88558543 88559592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3448 1 349 Organic Solute Cotransporters AT4G32390 83.143 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3448 - - gmx:100809504 591.267