Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3442 ATGGCAACCACCACGCCATCGTCCAAATGGACCAACAACATTTCCTCAATAGCTGCTCGCATCTTCTTCGTCTTCATCATCTTTCAGATCCCTCTTTTCAGGGTGACTTGCAGATCTGGTGTGTGTACAACCCCTTTGCATGTCACATCGTCGCAGTTAATTGCAAGTGAGATCTTTCCTGTTGTTGTTGTGAAGGGCCTTCTGTACCCAGGGGCTGCAGTAAACGGCCTCATCCACAACATGACTGTTCCAAGTTGGGATAGTTTGTTGAACTTGTATAACTTGACCAGTGTGAAGGAAGCTTCTGCAGTAACTGATCTTCAGCGCTTGGAGGTTCTTGCGGGGAGCTACTTCTCAGTGGCAGGAGCACTTGTGGGTATTCTAAAACCCGGGAGAATGAGCATGTTTGGGTCCCTTCTTATAATTTGGGGACTGGTCAAAGAAGGGATTTTAGGAAAGCCAGTAAATTCTGATCCTTCAAAAGCCGTGTACGTCTACCCAACAATGGTGATTGCCTTGATATGTGCTTTCTCATCTGTTAAGTATGATGTGAAGAAGGTTGTTAGGTCGGCCCCTGTCAGGTCCTCTGCTAGACCACTTCAGAGCTCATCTAAGTCTAAGCTGAAATAA 630 0.4635 MATTTPSSKWTNNISSIAARIFFVFIIFQIPLFRVTCRSGVCTTPLHVTSSQLIASEIFPVVVVKGLLYPGAAVNGLIHNMTVPSWDSLLNLYNLTSVKEASAVTDLQRLEVLAGSYFSVAGALVGILKPGRMSMFGSLLIIWGLVKEGILGKPVNSDPSKAVYVYPTMVIALICAFSSVKYDVKKVVRSAPVRSSARPLQSSSKSKLK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3442 209 PANTHER TAIL FIBER 8 209 - -
Ssu1g3442 209 PANTHER TAIL FIBER 8 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3442 Ssu-Chr1 88497042 88498948 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3442 - - gmx:100784749 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3442 1 88497042 88498948 Ssu1g3442 1 88497042 88498948 ECH