Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3436 ATGAGATTGAGAAAGGGAAGTAAAGTGGAGATCCTTGGCAACACGGATAGGCTTAGTGTGGAATGGCGTTGTGCTCGTATAATTTCTGGTAATGGGCACACCTACAGTGTCCAGTATGACCGTTATAGCACAACAAGTGAGGCTAGCATAGAGAGAGTTTCAAGGAAGGCCATCAGACCGTGTCCCCCTCTTATTAAAGGTATTGAGAGTTGGGCAGTTAATGATCATGTGGAGGTTTATGATGGTTCTTGGAAAGCGGCTACTGTTTTGAAATTCATTGGTGGAGAGTTCTACTTGGTTAGGTTGTGGATATCTTGCAAGGAGTTAAAGGTTTCAAAAGTAAACATGAGGGCACGCCAATCTTGGCAAAATGGTCAATGGGTTGTCATGCCAAAGGGATCAGGCAAGTCTGGAGTTGGGAAGTCTAGCTGGTATTTGATTTCAAACAGTTACAAGGATCAGCCTGAAAATCAGCGAACCAGAAATATTTTTTCTCGAGGATTAGATGCCAGCAGTCACCAGGAGCCTCATATGGCCTCATCTTCAACATTGAAGAGAATGTCCCCTTATGGCTCCTCTCTTGTTGAGGTTTATCCCAGAAAATTAAGGGCTGTTGAGAATATGGGTGAGTGTGAAAGATTCAAAGCTGTAACCACAGCCCCCTTGTTGCAAAAGGTAGATGCTGTTGCTTACCCACAAAATAATATGGGTGAAAAATGCATGCATACTTCCTTAACTAATGGTACCAACCAATATTATGAAACAGGAAAGGAGAATTCTTGTAGTGTTTCAACACACTTTCTTGAAAGAATGGAAGAACCTGATTATTCTTGTAGTGATCTGAGTTCAGTTGGCAGTTGTAGTGTGATAAGtagtaattcaaataaattttccaGTGATACCTTAGCAGGTCCTTGCCAAGATGAAGATACCCTTTGCAGTGATGCAGAATCTCTAGATGTTGGAGATGTGGATAAAGGATGCTCCATTTCTTGTGAAGAGGTTGTAGCAGAAAGAATTCATAGGGCCAGTGTAGGAGGCTTGCATGCCTTGCTTCCAATGGCTAAATATGATGCTAGGTTTGCTTCTTCTCTCTCCGCAAATTAA 1107 0.4164 MRLRKGSKVEILGNTDRLSVEWRCARIISGNGHTYSVQYDRYSTTSEASIERVSRKAIRPCPPLIKGIESWAVNDHVEVYDGSWKAATVLKFIGGEFYLVRLWISCKELKVSKVNMRARQSWQNGQWVVMPKGSGKSGVGKSSWYLISNSYKDQPENQRTRNIFSRGLDASSHQEPHMASSSTLKRMSPYGSSLVEVYPRKLRAVENMGECERFKAVTTAPLLQKVDAVAYPQNNMGEKCMHTSLTNGTNQYYETGKENSCSVSTHFLERMEEPDYSCSDLSSVGSCSVISSNSNKFSSDTLAGPCQDEDTLCSDAESLDVGDVDKGCSISCEEVVAERIHRASVGGLHALLPMAKYDARFASSLSAN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3436 368 SMART agenet_At_2 69 124 IPR014002 -
Ssu1g3436 368 SMART agenet_At_2 1 66 IPR014002 -
Ssu1g3436 368 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 259 - -
Ssu1g3436 368 Pfam Agenet domain 6 63 IPR008395 -
Ssu1g3436 368 PANTHER PLANT TUDOR-LIKE RNA-BINDING PROTEIN-RELATED 1 259 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3436 - - gmx:100800837 560.066