Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3401 ATGGTTTTACTTTCTTCctccctctccttcttcttctccccCACTCCCACTCTGCTTCCTAATAACCTTATCTTCAGAAACAATACCAGGGCAGTCCTTAACCAACACAAATGCCCATTATCCGAGGAAAGACCACGCTTTTCATGTTGCGCCCTAAAACCCACTTCACAAAACAGGATTTTTAGAAGGGATTTGATGCTGTTAGGCCTGACTTCGCTACCTCTAACATGGCCACTTTCAGTGACTCTTGCTGAAGAAGAGCCGAAAATGGCTTCattttttgatgaaataaaTGCCTATTCTTATCAGTACCCTGTTGAGTTGCCTTCCCAGGATTTTTCCTTCAAATGGGTTGAATCCCGAAAGCCAGAACGGTATTCATCAGCTGCTCCGCTTTCTCCTGATGCACGCCTGCGCATTGTGTCTGAGCGTATTGACTTTGTTGATAATGTCATCATTTCTGTCACGATAGGTCCGCCAAATTCAAGCATTATAAAATCAAAGGATAAGAGTAAATGGACTGCAAAAGATGTTGCTGATTCAGTTTTAGCTGACAGATCTTCACTGCGAATTACCTCAAGTCAGCGCTTAGAAGAGAGTTCAGTTCTTAATACCCATTCTAGTGAAATTGATGGTGAGATGTACTGGTATTATGAATACCTTGTTCGTAAAGCACCTTTGAAACTTACTGATGAATCAAGCATTTACCGGCACTATCTTGCTTCAACAGCTGAAAGAGATGGTTATTTGTACTCTATCAGTGCTTCAACCGTCAGCCCACGGTGGGAAAAACTGGGGCCTTTCCTGGGAAAAGCGGTGAGTTCGTTTCGTCTTCTTGGCCCAACAGAAAATTATGTTCCTCCGTACAAAGATCCTTGGAGATTTTGGTGA 891 0.4108 MVLLSSSLSFFFSPTPTLLPNNLIFRNNTRAVLNQHKCPLSEERPRFSCCALKPTSQNRIFRRDLMLLGLTSLPLTWPLSVTLAEEEPKMASFFDEINAYSYQYPVELPSQDFSFKWVESRKPERYSSAAPLSPDARLRIVSERIDFVDNVIISVTIGPPNSSIIKSKDKSKWTAKDVADSVLADRSSLRITSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLKLTDESSIYRHYLASTAERDGYLYSISASTVSPRWEKLGPFLGKAVSSFRLLGPTENYVPPYKDPWRFW 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3401 296 SUPERFAMILY Mog1p/PsbP-like 92 278 IPR016123 -
Ssu1g3401 296 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC 25 296 - -
Ssu1g3401 296 Pfam PsbP 91 277 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Ssu1g3401 296 PANTHER - 25 296 - -
Ssu1g3401 296 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 78 278 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3401 - - gmx:100809891 512.686