Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3387 ATGCCGGCCGCAGAAGAAGGCGGTGGCGGCGAGGAGCGAAACGCGCGTTTGGAGGAAAAAAGCGATTTGGAGTCTGAAATTTCGAAGCTGCGTGGACGATGGGAACTCGCTTCTGTTCTCAATTTTTTGGACGTGTTTGGTCCAATACTTGGTAAAGATTTGAAGCTTTCTGCTGAAGATATTGAGATTGGGCTTGTCAAGCTTGATGCTTCGCTTGCTCGGCTTCACATTCAACTTCTGAAGGGAATGCCACCTGTGAGTAAAACACTGGAGGATTCTGATAAATGGGTGACTGCACTCTGTAAGAAACTGACTATGTGGTGGCCATGGGTTGCTGAGGGGGAGATTCCACTTGTACCATCTAAAGGAGAGGAGATATCCAAGTACAAGGAACTTGATCCGTCAGATCGTTTACTACTGCTAAAAGCGCTTTGTGAAGTTAGAGCTGATCAACATGATGCAGTGTCATACATCAATGATTCTTTAAAAGAAGGAACCCAAATTTCATCTTTTCTCAAAGATGCCTTAGGAAGAGATGGAACTGGCACATCTTActgGTATGATGCAACTTCAAAAGGTCAGAGTCACAGATTGTACAGGGAAATTATCACATCAGACTCAATTCCAAAAGATAAGGATGAAGGATGTTTATCACTACCCACCGTTCAATGGGAAACACTTGCTTCCAATCTTGAAGGTTTTTCAAAAGTAGCTGAAAAATTCTCATTCAGCAAGTCTGCTGTGGAAGTTGCTGTTAGCATGAAGCTTCAAAGTGATGCTATTCCTGCTCTTGAAAAGCTTTGGAAGaagaaagaaagagcaaTAAAGCAAAAGCAAAGGCAGGATATGCTGTTAAAAGATTTTCAGAATTCATATTGTTCTGGAAATACACGCTCTTGTCGCACTCGAAGGcctattaattatacatttgAAGCTTATGATCGAGCAATGAAGGAGGCAATACAGCTAACAAATAAAAGGAAAAAGTCTCCTGTTGCTGACCAAGATAAAACCAGAGGATCAGAGGATAAAACCAGAGAATCAGAAGATAAATCCAACACAAAAGATGTTTCAACAGACAGTGATTCTGAAAGGGATGTGTTCCCGGTATCTGATAGTGATGACACTGGTTATGAAAATGAGAATCATGGTAGCAGCGAGGATGCTGAGGAGGATGGTGTTGATGGTGAGTTTGGCAACTCGGAAGCACACTCAAGCCATGCAGTTTCTTATCCCAAGGGGGTTCGCTGCAGCAAGCGGTTAGCTGGAGTTGCTAGCCACACTATTTTAGAAAGCAGAGGCTTAACTACAAAGCAAAGATTGAGACAAAGACCCACCCGCAATTCTGCTATAGAATCTATCATCGTACTGGATTCGGAGGACGAAGCACATGAAGGGAAGACAGATTTGTCAGAGTCTACTTAG 1425 0.4196 MPAAEEGGGGEERNARLEEKSDLESEISKLRGRWELASVLNFLDVFGPILGKDLKLSAEDIEIGLVKLDASLARLHIQLLKGMPPVSKTLEDSDKWVTALCKKLTMWWPWVAEGEIPLVPSKGEEISKYKELDPSDRLLLLKALCEVRADQHDAVSYINDSLKEGTQISSFLKDALGRDGTGTSYWYDATSKGQSHRLYREIITSDSIPKDKDEGCLSLPTVQWETLASNLEGFSKVAEKFSFSKSAVEVAVSMKLQSDAIPALEKLWKKKERAIKQKQRQDMLLKDFQNSYCSGNTRSCRTRRPINYTFEAYDRAMKEAIQLTNKRKKSPVADQDKTRGSEDKTRESEDKSNTKDVSTDSDSERDVFPVSDSDDTGYENENHGSSEDAEEDGVDGEFGNSEAHSSHAVSYPKGVRCSKRLAGVASHTILESRGLTTKQRLRQRPTRNSAIESIIVLDSEDEAHEGKTDLSEST 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3387 474 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 26 381 - -
Ssu1g3387 474 MobiDBLite consensus disorder prediction 323 414 - -
Ssu1g3387 474 MobiDBLite consensus disorder prediction 1 20 - -
Ssu1g3387 474 MobiDBLite consensus disorder prediction 452 474 - -
Ssu1g3387 474 MobiDBLite consensus disorder prediction 457 474 - -
Ssu1g3387 474 MobiDBLite consensus disorder prediction 323 389 - -
Ssu1g3387 474 PANTHER REMODELING AND SPACING FACTOR 1 26 381 IPR028938 GO:0006355|GO:0031213
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3387 Ssu-Chr1 87299030 87303994 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3387 - - adu:107463013 610.527