Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3384 ATGATGGGAGGGGCAGCCAAAACCCTAACAAATCTGTGCTCCTCTTTCCCATTAACAACCAAAACCCAAAACCCAGTCACCACACCCACAACTAACCACTCTTTCCCTTCTACTCGCTTTCGCCACCGCGCCATTTCAGCGGTGGCCAACCCGGTCCAACCTCCTCCACCCATCACCGCCGAGTCGGTGACTCCGGGTCAGTACCGAGTCGACGTGCTCTCGGAATCGCTCCCCTTCATCCAGAAATTCCGCGGCAAAATCATCGTCGTCAAGTACGGTGGCGCCGCCATGAAATCCCCGGAGCTGCAGGCCTCCGTGATCAACGACCTCGTCCTCCTCTCGTGCGTGGGCCTCCGCCCCGTCATGGTCCACGGCGGTGGCCCCGAGATCAACTCCTGGCTCGGCCGCCTCAACATCCCCGCCGTCTTCCGCGATGGCCTCCGCGTCACCGACGCCGACACCATGGAGATCGTCTCCATGGTCCTCGTCGGCAAGGTCAACAAAACCCTCGTCTCCCTCATCAACAAGGCCGGCGCCACCGCCGTCGGCCTCTCCGGCATGGACGGCCGCCTCCTCACCGCGCGCCCCAGCCCCAAGGCCGCCGACCTAGGGTTCGTCGGCGAGGTCGCCAGGGTCGACCCCGCCGTGCTCCGCTCCCTCATCGACACAAACCACATTCCGGTGGTGACGTCCGTCGCGGCGGACGAGTTCGGACAGCCTTACAACATCAACGCCGACACGGTGGCCGGAGAATTGGCGGCGGCGCTCGGCGCGGAGAAGCTGATTCTGTTGACCGATGTGGCGGGGATTTTGGAAGATAGGAACAACCCTAACAGCTTGGTGAAGAAGATTGATATAAAAGGGGTTAAGAGAATGATGGAAGATGGGAAGGTTGGTGGTGGAATGATACCTAAGGTTAATTGTTGCGTGAGGTCACTGGCGCAAGGGGTTACTACGGCGAGTATTATTGATGGTAGGGTTCCGCACTCTTTGTTACTCGAGATTTTAACTGATGAAGGTGCTGGAACTATGATAATTGGCTAA 1044 0.59 MMGGAAKTLTNLCSSFPLTTKTQNPVTTPTTNHSFPSTRFRHRAISAVANPVQPPPPITAESVTPGQYRVDVLSESLPFIQKFRGKIIVVKYGGAAMKSPELQASVINDLVLLSCVGLRPVMVHGGGPEINSWLGRLNIPAVFRDGLRVTDADTMEIVSMVLVGKVNKTLVSLINKAGATAVGLSGMDGRLLTARPSPKAADLGFVGEVARVDPAVLRSLIDTNHIPVVTSVAADEFGQPYNINADTVAGELAAALGAEKLILLTDVAGILEDRNNPNSLVKKIDIKGVKRMMEDGKVGGGMIPKVNCCVRSLAQGVTTASIIDGRVPHSLLLEILTDEGAGTMIIG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3384 347 Pfam Amino acid kinase family 86 323 IPR001048 -
Ssu1g3384 347 Gene3D - 63 347 IPR036393 -
Ssu1g3384 347 PANTHER BNAC04G55460D PROTEIN 23 347 - -
Ssu1g3384 347 PRINTS Glutamate 5-kinase family signature 297 317 IPR001057 GO:0005524|GO:0016301
Ssu1g3384 347 PRINTS Glutamate 5-kinase family signature 244 271 IPR001057 GO:0005524|GO:0016301
Ssu1g3384 347 PRINTS Glutamate 5-kinase family signature 117 131 IPR001057 GO:0005524|GO:0016301
Ssu1g3384 347 PANTHER N-ACETYLGLUTAMATE SYNTHASE 23 347 - -
Ssu1g3384 347 CDD AAK_NAGK-C 72 345 IPR041727 -
Ssu1g3384 347 SUPERFAMILY Carbamate kinase-like 69 346 IPR036393 -
Ssu1g3384 347 TIGRFAM argB: acetylglutamate kinase 88 322 IPR004662 GO:0005737
Ssu1g3384 347 Hamap Acetylglutamate kinase [argB]. 85 340 IPR037528 GO:0003991|GO:0006526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3384 K00930 - gmx:100780093 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3384 1 87286451 87287494 Ssu1g3384 1 87286451 87287494 ECH