Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3361 ATGAGTCAACCCGCCACCGCCGCCGATCCCAACGCTACTGCGACAACGAATGATGCGCCGTCGCAGCCGGAAAACGCGGATGTTGTGGTGCAGTACGTGGTGCTCCGGCGAGACCTGATCGACACGTGGCCGCTAGGGAGCGTGGTCACTCAAGGTTGCCACGCTTCTGTTTCGGCCGTTTGGTCCAACAGAGACGATCCTTTCACCGTCGATTATTGCAGCCCCGATAAAATAGATTCTATGCACAAAGTTACACTTGAAGTAAAGGGAGAATCCCAGATCAAAAACTTGTCTGAGAAGCTTACATCTGGTGGAATCATTCACAAACTGTGGATTGAACAACCTGAAAACATACCTACATGCCTTGCCACAAAACCTTACCCCAAGTCAATCGTATCTTCGTATTTTAAGAAGCTGAAACTCTGTAAGTGA 432 0.4954 MSQPATAADPNATATTNDAPSQPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNRDDPFTVDYCSPDKIDSMHKVTLEVKGESQIKNLSEKLTSGGIIHKLWIEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3361 143 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 1 143 IPR042237 -
Ssu1g3361 143 Gene3D Bit1 26 142 IPR023476 -
Ssu1g3361 143 SUPERFAMILY Peptidyl-tRNA hydrolase II 29 142 IPR023476 -
Ssu1g3361 143 MobiDBLite consensus disorder prediction 1 23 - -
Ssu1g3361 143 Pfam Peptidyl-tRNA hydrolase PTH2 30 142 IPR002833 GO:0004045
Ssu1g3361 143 CDD PTH2_like 29 142 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3361 K05969 - gmx:100788281 270.396