Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3347 ATGAAGCCCTCCACCGAAGCAGCCAAGGCCACCACCATCGACATCGTCGAAAACCACCCCGACGAAGAAAAACTCCAACTGAATGTTCCCTTGCTCTTGCAACCATCTTACGCGGCATCAAAATCCATCGCCTCTGACGAACTGCGAAACCTTCGCACGAGCCTTAAATGCTGTGCTCTCGACCACTCTTCCCGCGTCGGAAAACTCGTTTCCTACGTCGTCTTCATATTCCTCACCATCGCTGTCCCTCTCTTCACCTCCCTCTTCGTTCGTGTCCCTGCCTCTCCTTCCCAACTCGACCCCTTCAACTTCAACAAGCTCCTCCAACTACCACAATCGGCCCTAGCCATCATCGCCTTCTTCACTCTCTCCCGTTTCTTCCGAAGGTGTGGGCTTAGGCAGCTTCTGTTCCTAGATGTGTTACAAGATGACTCGATGTATGTTCGACGTGGGTACACGCGCGAGCTTCAGAAGGCGTTCAGATACTTAGCGTGCATAATATTACCTTCCTTTTTCGTAGAACTTGTTCACAAAATCATCTTCTCTTTGAGGGTGGAAATTTCAGTTCAATCATGTGGGATCCCCATGAACTGGGTTGTGTTTGTTTTAGTGTTGGTTTCTTGGGTTTACAGAACGGGGTTGTTCTTGTTGGCGTGTGTGCTTTTTAGGCTGACCTGCGAGCTTCAGATTTTGAGGTTTGAAGGGCTTCGCAAGCTTTTTGAAGGGTGTGGGTCTGATGCAAGCATGATATTCAGAGAGCACGTGAGGATTAGGAGGCAATTGTGGATCACGAGTCATAGATACAGGTTCTTTATAATTAGTTGTTTGGTGACAATCACGGTTAGTCAGTTGGGTTCTCTCTTGCTGGTTTTGGAATCCAAATCTGACACCACCTTCTTCAATTCTGGTGACCTTGTGATTTGTTCAGCTGTGCAGTTATGTGGATTCTTCTTGTGCCTTATGGGTGCGGCGAGAATCACACACAGGGCTCAAGGGATAGTGTCAATTGCCACAAAATGGCACATGGTGGTGACCAATGCATCTGCTGAATCAGACCAGTGGGAAGCCCAAATGCCAGAGGGGCTACCCAGTCCTACTGGCAGTGATTCTGATTCCTTGGACATATATATATCAGTAACCCCACAACGACCTTCTTCTTTCCAAACCAGGCATGCTTTAGTGACGTATTTACAGCACAACTATGGAGGGGTAACACTATTTGGGTTTGTGCTTGATCGAGGGTTGCTTCATACTCTCTTTGCCTTTGAGTTTTCTATGGTGCTTTGGATTCTGAGTATGGTGGCTGTCTAG 1311 0.4775 MKPSTEAAKATTIDIVENHPDEEKLQLNVPLLLQPSYAASKSIASDELRNLRTSLKCCALDHSSRVGKLVSYVVFIFLTIAVPLFTSLFVRVPASPSQLDPFNFNKLLQLPQSALAIIAFFTLSRFFRRCGLRQLLFLDVLQDDSMYVRRGYTRELQKAFRYLACIILPSFFVELVHKIIFSLRVEISVQSCGIPMNWVVFVLVLVSWVYRTGLFLLACVLFRLTCELQILRFEGLRKLFEGCGSDASMIFREHVRIRRQLWITSHRYRFFIISCLVTITVSQLGSLLLVLESKSDTTFFNSGDLVICSAVQLCGFFLCLMGAARITHRAQGIVSIATKWHMVVTNASAESDQWEAQMPEGLPSPTGSDSDSLDIYISVTPQRPSSFQTRHALVTYLQHNYGGVTLFGFVLDRGLLHTLFAFEFSMVLWILSMVAV 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3347 436 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 17 435 - -
Ssu1g3347 436 Pfam Protein of unknown function (DUF3537) 46 422 IPR021924 -
Ssu1g3347 436 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 17 435 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3347 Ssu-Chr1 86514381 86517027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3347 - - gmx:100804399 725.702