Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3346 ATGGTTTTTTGGGTTTTTGGCTATGGTTCACTGGTGTGGAACCCGGGATTCGATTACGACGAGAAAAGTATTGGTTTCATTAAGGACTACAGACGCGTGTTTGATTTAGCGTGCATTGATCACCGGGGAACACCTGAAAACCCTGCGAGAACTTGCACATTGGAGCAGAAAGAAGGGGCAATTTGCTGGGGAGCTGCTTATTGTGTTCGAGGAGGCcctgaaaaggaaaaaaaggttatgcagTATTTGGAGCGACGGGAATGTGAATATGACCAAAAGACTCTTGTAAACTTCTTCAAGGAAGGAGATTCACTGCATCCTGCTTTAACTGACGTAATAGTATTCACATCTACTCCAGACAAAGTGAATAACAAATACTACCTGGGACCTGCCCCACTGGATGACATGGCTAgGCAAATAGCAACTGCTTATGGCCCTTGCGGAAACAACAGGGACTATCTTTTCCTTCTAGAAAAGGCCATGTATGATATTGGCCAGGAGGACGACTTGGTGATAGAGCTTGCCAATGAAGTGAGGAAAGTACTTGGAGTGGGAAATGCACTGCCAAAGGACAAGAAATTGGTTGGACCAGCACAACTTCCACACCCTCCTCATGTACCGATCCCTACCCTTCAACTGCACCACCCACTGCCAGAACCCATTGCTATGGATACTTGA 678 0.4454 MVFWVFGYGSLVWNPGFDYDEKSIGFIKDYRRVFDLACIDHRGTPENPARTCTLEQKEGAICWGAAYCVRGGPEKEKKVMQYLERRECEYDQKTLVNFFKEGDSLHPALTDVIVFTSTPDKVNNKYYLGPAPLDDMARQIATAYGPCGNNRDYLFLLEKAMYDIGQEDDLVIELANEVRKVLGVGNALPKDKKLVGPAQLPHPPHVPIPTLQLHHPLPEPIAMDT 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3346 225 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 225 IPR006840 GO:0003839|GO:0006751
Ssu1g3346 225 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 2-2 1 225 - -
Ssu1g3346 225 CDD GGCT_like 5 110 IPR013024 -
Ssu1g3346 225 Pfam ChaC-like protein 4 180 IPR006840 GO:0003839|GO:0006751
Ssu1g3346 225 ProSitePatterns Glycosyl hydrolases family 5 signature. 170 179 IPR018087 GO:0004553|GO:0005975
Ssu1g3346 225 MobiDBLite consensus disorder prediction 205 225 - -
Ssu1g3346 225 Gene3D - 2 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3346 Ssu-Chr1 86489901 86491912 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3346 K22596 - gmx:100778704 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3346 1 86489901 86491912 Ssu1g3346 1 86489901 86491912 ECH