Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3344 atgagcGTGAACGTGAATTGTGTGGGCGGCGACACGCACAACGTCTTCGTTTACGGTAGTTTGTTGGCCGATGAGGTTGTCCATACCCTCTTGAAGCGCGTCCCTCCAACTGCGCCTGCCATCCTCCACGACTATCATAGGTTTAAGATCAAAGGTCGCGTTTATCCCGCTATTCTCCCCGTCCAGAATAACAAAGTTACTGGCAGGGTGCTTCTTGGTATCTCCGGGGTAGAACTAGATATTTTAGATGGGTTCGAGGATGTTGAATATACCAGAAGTGATGTTGAGGTTTTCTTGATGGACAAGTCTGAAAAGTTACAAGTTCACGCTTATGTTTGGAGTAACCAAAATGATCCCAACTTATATGCAGAGTGGGATTTTGAGgAATGGAAACAAGTTCACATGAATGATTTCGTGAAGATGACTAATGGTTTTATGCAAGAGTTGGAATTGCCAGAATCAAAGCCAAGAGTGCAGACTTATGAAACGTTCTACAAGCCAGAAAACGATAAGCCACTTGAACCTTGA 528 0.4356 MSVNVNCVGGDTHNVFVYGSLLADEVVHTLLKRVPPTAPAILHDYHRFKIKGRVYPAILPVQNNKVTGRVLLGISGVELDILDGFEDVEYTRSDVEVFLMDKSEKLQVHAYVWSNQNDPNLYAEWDFEEWKQVHMNDFVKMTNGFMQELELPESKPRVQTYETFYKPENDKPLEP 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3344 175 PANTHER AIG2-LIKE PROTEIN 13 154 - -
Ssu1g3344 175 PANTHER AIG2-LIKE PROTEIN D 13 154 IPR045038 -
Ssu1g3344 175 CDD GGCT_like 15 113 IPR013024 -
Ssu1g3344 175 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 12 136 IPR036568 -
Ssu1g3344 175 Gene3D - 3 119 - -
Ssu1g3344 175 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 15 127 IPR009288 -
Ssu1g3344 175 Gene3D - 120 169 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3344 - - gmx:100527521 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3344 1 86475917 86478264 Ssu1g3344 1 86475917 86478264 ECH