Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3343 atggcaaCCATGGCTGATCAACCAAGAACTGCTGGGTCCTACTCCTATGGAAACCCCTATGGAACCACCTATGAGACCAACACCAACATTAACAACCCACCTACACGCCAAATCGTCAAGTTCATAACCGCTGCCACTATTGGCATCACACTCTTGCTCCTGTCTGGGTTGATCCTCACAGGCACTGTCATAGGTTTGATCATtgcaacccctcttcttgttaTCTTCAGCCCCATCCTTGTCCCAGCTGCCATTGTGCTGTTCCTAGTTGCTTCTGGCTTTTTGTTCTCCGGTGGCTGTGGTGTGGCTGCCATTGCTGCTTTGTCTTGGATTTACAACTACGTGTCCGGGAACCAGCCTGCAGGTTCCGACACCCTTGACTATGCAAAAGGGTACCTTGCTGAtaaggcaaaggatgtgaaggAAAGGGCAAAGGATTACGGAAGTTATGCTCAGGGTAGACTTCAAGAGGCCACACAAGGAACTTATTAA 492 0.4492 MATMADQPRTAGSYSYGNPYGTTYETNTNINNPPTRQIVKFITAATIGITLLLLSGLILTGTVIGLIIATPLLVIFSPILVPAAIVLFLVASGFLFSGGCGVAAIAALSWIYNYVSGNQPAGSDTLDYAKGYLADKAKDVKERAKDYGSYAQGRLQEATQGTY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3343 163 Pfam Oleosin 36 148 IPR000136 GO:0012511|GO:0016021
Ssu1g3343 163 PANTHER OLEOSIN 21 160 - -
Ssu1g3343 163 ProSitePatterns Oleosins signature. 61 83 IPR000136 GO:0012511|GO:0016021
Ssu1g3343 163 PANTHER OLEOSIN 21 160 IPR000136 GO:0012511|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3343 Ssu-Chr1 86473165 86473656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3343 31 140 Lipid Metabolism Gene Families AT2G25890 65.455 6.15e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3343 - - gmx:100301903 255.758