Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3333 ATGGCGCCTCCGAAGCTCTTCGTCTTCGTGCTTTCAGTAACCCTAATTTTCGCCCTCGCTGGGGCCGAAGCCGATGTTTCCATCGAAGGAAGCACTCAAGAGCTTGATACCTCCGCCGTCAAGATCGAATTAGATCAACTCAATTCCAAGATCCGAATTCTCGaatcTCAAATCAGTGACAAGTCGGAAGAAGTGAAGAAAAAGGACGAAATTGtagcagaaaaagaaaaaatcattgaagATAAATCGATTACCATACAATCCCTGCAGAATGAGATTGCTTCGCTCCAGAAAAAAGGGTCGTTGGATGCTGAGGAGCAGGTTGGAAAGGCTCATGCACGTGCTGGTGAACTACAGAAGCAGGTGGACAAGCTTAAAAGGGAactaaaaacacaaaacaaGGAGAAAGTGAACTGGGAAACTCGAGTACTTGAGCTAGAGAAAAAGATTCATGACTTGAACTCAAAATTAGAAGATATTCAAAAGATAAATGAGGAACAGAAGACAAAAATTCATAAGACTGAACGTGCTCTTAAAGTTGCTGAGGAAGAAATGATGAAGGCAAAGTTTGAGGCAACTGCCATAGAAAAAGAGCTGAGGAAGGCTCATGGTGCTTGGCTTCCACCTTGGCTTGCTGTACACTATATTCGTAGTAAGTCCTTGGTTGAGACTCATTGGAACAAACATGGGAAACCTGCTTTGGAAATGTTTGCTCAAAAGGCCCTAGAGAAAAAGGCACAAGCTGGAAAGTGGGCTGAACCTCATGTGGAAACCATTAAAACTaaATGGATCCCGACTGTAAAAGAACAATGGTCTGTGGTGAAAACAAATGCTGAACCTCATGTGGAATTATTGACCACAAAAACTGTTGAAGTTTACGAGGCATCAAAGAATGCAATTGCTCCCCACTTAAGCAAGGCAAAAGAATTTGTAGATACTTATTATCAGGAAGCTAGAAAGTTCAGCAAGCCATACATTGATCAGATTGCTATTGCAGCTAAACCTCACGTTGATAAAGTACAAGTGGTTTTGAAGCCCTACACAAAGGAGGTTGTTCATGCTTATGGGAAGTTTTTGGAATCAGCTACTACATATCATCGCCAGGTCCAAGCTACTGTCCAAGAGACACTGAAAAAGCACGAGCTTACTAGACCTCTTGCTACAAAAGAGTTGGAATGGTTTGCGGCCTCTGCCCTTTTGGCTTTACCTATTATTTTAGTGGCTAGACTGTTTTCAGCTGTTTTCTGCAGCAAAAAAGTGAATAAACCTTCTCGAAATGGAAACACTCACCATGCACGACGTAAAGCTAAGCGAGGGCATCCAGACAAACACACAACATGA 1341 0.4131 MAPPKLFVFVLSVTLIFALAGAEADVSIEGSTQELDTSAVKIELDQLNSKIRILESQISDKSEEVKKKDEIVAEKEKIIEDKSITIQSLQNEIASLQKKGSLDAEEQVGKAHARAGELQKQVDKLKRELKTQNKEKVNWETRVLELEKKIHDLNSKLEDIQKINEEQKTKIHKTERALKVAEEEMMKAKFEATAIEKELRKAHGAWLPPWLAVHYIRSKSLVETHWNKHGKPALEMFAQKALEKKAQAGKWAEPHVETIKTKWIPTVKEQWSVVKTNAEPHVELLTTKTVEVYEASKNAIAPHLSKAKEFVDTYYQEARKFSKPYIDQIAIAAKPHVDKVQVVLKPYTKEVVHAYGKFLESATTYHRQVQATVQETLKKHELTRPLATKELEWFAASALLALPIILVARLFSAVFCSKKVNKPSRNGNTHHARRKAKRGHPDKHTT 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3333 446 Gene3D - 37 220 - -
Ssu1g3333 446 Gene3D Apolipoprotein 253 392 - -
Ssu1g3333 446 Coils Coil 72 99 - -
Ssu1g3333 446 PANTHER OS08G0519400 PROTEIN 1 443 - -
Ssu1g3333 446 MobiDBLite consensus disorder prediction 424 446 - -
Ssu1g3333 446 SUPERFAMILY Apolipoprotein A-I 234 377 - -
Ssu1g3333 446 Coils Coil 108 198 - -
Ssu1g3333 446 MobiDBLite consensus disorder prediction 422 446 - -
Ssu1g3333 446 SUPERFAMILY Tropomyosin 37 200 - -
Ssu1g3333 446 Coils Coil 37 64 - -
Ssu1g3333 446 PANTHER OS08G0519400 PROTEIN 1 443 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3333 - - gmx:100781922 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3333 1 86344545 86350760 Ssu1g3333 1 86344545 86350760 ECH