Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3327 ATGCAGAGTCTGCAACAGAAGGCCTCTGAATGGAGTGGAGTTTCCACAGCTGATGCTTTTGCCATCGACGACGCCAATTTGTTTAACAAGCTCGGCCTTCAAACCTTCGTTACCCTCTCTACTAATTTCTACAACAGGGTGTATGACGACGAGGAAGAGTGGTTTCGTTCGATATTTGCCACTTCTGAGAAAGAAAACGCAATTCAGAACCAGTACGAGTTCCTCGTGCAGAGAATGGGAGGTCCCACTCTCTATTCCCAGAGAAGAGGGCACCCTGCTCTAATCGCTCGACATCGACCATTTCCTGTTACGCACCAAGCTGCAGACAGGTGGTTATATCATATGGGACAAGCATTGGACAGTAGTATCCCAGATATAGATGATGATGACTCAAAGATCAAACTGATGAACTTTTTCAGGCACACTGCATATTTCCTTGTGGCCGGAGTTGAGCAAAAGGATCAAAACCTTCACACACCATGTAAGGATGCAGCCCTAAAGCAGCACCCTTGTAAAAACTTCTAG 525 0.4629 MQSLQQKASEWSGVSTADAFAIDDANLFNKLGLQTFVTLSTNFYNRVYDDEEEWFRSIFATSEKENAIQNQYEFLVQRMGGPTLYSQRRGHPALIARHRPFPVTHQAADRWLYHMGQALDSSIPDIDDDDSKIKLMNFFRHTAYFLVAGVEQKDQNLHTPCKDAALKQHPCKNF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3327 174 Gene3D Globins 1 153 IPR012292 GO:0019825|GO:0020037
Ssu1g3327 174 CDD TrHb2_AtGlb3-like_O 28 148 - -
Ssu1g3327 174 PANTHER TWO-ON-TWO HEMOGLOBIN-3 1 160 IPR044203 GO:0005344|GO:0015671
Ssu1g3327 174 SUPERFAMILY Globin-like 26 147 IPR009050 -
Ssu1g3327 174 Pfam Bacterial-like globin 26 144 IPR001486 GO:0019825
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3327 Ssu-Chr1 86271260 86273876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3327 - - gmx:547753 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3327 1 86271260 86273876 Ssu1g3327 1 86271260 86273876 ECH