Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3325 ATGAAGTCAAAGGAGAGATGTGAGGAAACCAGAAAGGAATACTTGAAGAAAAAGCAAGCATTCGAGGAATGGTACCAGAAGCATTTACTGCGGAGGGGGCCTGATGAAGCAGAACATGAAAGAGGAGAGGAATTGAACACAAACAATCCTGTCTCGGAGAGGCAGTTTGTTGTTGAGAGCTTGAAGAAGAGATTAGAAGAGGAAGTTGAATCTCACCAAAAACTTTGTGTTCAGGTGCGAGAGAAATCACTACAGAGTCTCAAAACTCGCTTGCCTGAACTCTTCCGTGCACTGTCAGACTATGCTCATGCCTGTGCTGATGCTTATTTTAAACTGAAGTCAATCACACGGTCACGAGGTGGTGGGGCGTGA 372 0.4516 MKSKERCEETRKEYLKKKQAFEEWYQKHLLRRGPDEAEHERGEELNTNNPVSERQFVVESLKKRLEEEVESHQKLCVQVREKSLQSLKTRLPELFRALSDYAHACADAYFKLKSITRSRGGGA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3325 123 Coils Coil 62 82 - -
Ssu1g3325 123 PANTHER UNCHARACTERIZED 1 120 - -
Ssu1g3325 123 PANTHER DNA LIGASE (DUF630 AND DUF632) 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3325 Ssu-Chr1 86242584 86242955 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3325 - - gmx:100807597 231.876