Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3322 ATGCTGGCACGAAGACCTAATTACATCATGACTCCCACGTGGCACTCTTCTTCTTGGAAAAGGACTTGCCTCCCGGAACAAAATTGGACTTGCACTTCACTAGGAGTTCCAATCAAGCCACGTTCTTGCCACGCCAAGTTGCAGACTCGATACCCTTTTCATCCAATAAGGGTGGCATTAAAGGCGAGGAAAAGTATTGTGTCACTTCACTTGAATCCATGGTTGATTTTAGCACTTCCAAAGCTTGGAAAAAATGTTGATGAGGTCGTGTCCACAGAAGTGGACAAAGAAACGGGATTGCAGAAAGACACCATAGCTCCGGGAGTGAAGAAGTTAGCAGGTGACAAGGTTGTTGGGTGCCACAAACAGAATTACCCATATGCTGTTTTTTACTGTCACAAAACTAAGACCACCAGAGCTTACTCTGTGCCTTTGGAGGGTGCTAATGGGATCAGAGTTAAAGCGGTAGCAGTGTGCCACACTCACACATCAGAATGGAACCCCAAGCATTTGGCGTTTTAG 522 0.4598 MLARRPNYIMTPTWHSSSWKRTCLPEQNWTCTSLGVPIKPRSCHAKLQTRYPFHPIRVALKARKSIVSLHLNPWLILALPKLGKNVDEVVSTEVDKETGLQKDTIAPGVKKLAGDKVVGCHKQNYPYAVFYCHKTKTTRAYSVPLEGANGIRVKAVAVCHTHTSEWNPKHLAF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3322 173 ProSiteProfiles BURP domain profile. 81 173 IPR004873 -
Ssu1g3322 173 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 81 173 IPR044816 -
Ssu1g3322 173 PANTHER BURP DOMAIN PROTEIN RD22 81 173 - -
Ssu1g3322 173 Pfam BURP domain 79 173 IPR004873 -
Ssu1g3322 173 SMART BURP_2 1 173 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3322 Ssu-Chr1 86157274 86157882 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3322 - - gmx:100301893 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3322 1 86157274 86157882 Ssu1g3322 1 86157274 86157882 ECH