Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3314 ATGAAGAAAACGGAACGAATTGCCAATTTGGCTTTAGCAGGTTTAACCTTAGCGCCGCTTGTTGTGAAAGTAGATCCGaatgtaaatgttattttgacTGCTTGCCTCACTGTGTTTGTGGGCTGTTACCGTTCCGTCAAACCAACCCCACCAACTGAGACAATGTCCAATGAACATGCCATGCGTTTTCCCTTTGTTGGGAGTGCAATGTTATTGTCACTTTTCTTACTCTTCAAGTTTCTATCCAAGGACTTGGTGAACACTGTATTGACAGGCTACTTCTTTGTACTTGGGATTGTTGCGCTTTCGGCAACATTATTACCATTTATTAAACGTTTTCTGCCAAAGCATTGGAATGAGGACCTCATAGTCTGGCGTTTTCCATATTTCCGTTCTTTGGAGATTGAGTTTACAAGGTCACAGATTGTTGCTGGAATCCCTGGGACTTTTTTTTGTGCCTGGTATGCTTTGCGGAAGCATTGGCTGGCGAATAATATATTGGGTCTTGCTTTCTGTATTCAGGGAATTGAAATGCTTTCTCTTGGGTCTTTCAAGACTGGTGCTATTCTCTTGGCTGGTCTATTTGTGTACGACATTTTCTGGGTTTTCTTCACTCCAGTGATGGTTAGCGTTGCAAAATCATTTGATGCTCCAATAAAGCTTTTATTCCCCACATCAGATTCTGCAAGGCCATTTTCAATGCTTGGACTTGGTGATATTGTTATCCCTGGTATTTTTGTAGCATTGGCGTTGCGGTTTGATGTGTCTAGAGGAAAACAGCCCCAGTATTTCAAGAGTGCATTTGTAGGATACACTGTTGGCTTGGTCCTTACAATTATTGTGATGAACTGGTTTCAGGCTGCACAGCCTGCTCTTCTGTATATTGTACCTGCTGTAATTGGATTTTTGGCTGCTCATTGCATATGGAATGGTGATGTCAAGCAGTTGTTGGAGTTCGATGAGTCAAAGACTGCCAATTCATCTCAAGAGAGTGATGCCAAATCTAGCAAAAAGGTTGAATAA 1023 0.4135 MKKTERIANLALAGLTLAPLVVKVDPNVNVILTACLTVFVGCYRSVKPTPPTETMSNEHAMRFPFVGSAMLLSLFLLFKFLSKDLVNTVLTGYFFVLGIVALSATLLPFIKRFLPKHWNEDLIVWRFPYFRSLEIEFTRSQIVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTSDSARPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQYFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGDVKQLLEFDESKTANSSQESDAKSSKKVE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3314 340 MobiDBLite consensus disorder prediction 321 340 - -
Ssu1g3314 340 Pfam Signal peptide peptidase 51 322 IPR007369 GO:0004190|GO:0016021
Ssu1g3314 340 PANTHER SIGNAL PEPTIDE PEPTIDASE 1 1 340 - -
Ssu1g3314 340 SMART psh_8 51 310 IPR006639 GO:0004190|GO:0016021
Ssu1g3314 340 PANTHER SIGNAL PEPTIDE PEPTIDASE 1 340 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3314 Ssu-Chr1 85925969 85931132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3314 K09595 - gmx:100784956 649.818