Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3309 ATGGTGTTCTACTTCAAAGCGCGCCCAGAAGCTGGCGATTACACCATCTTCATGGGCCTCGACAAGTACGAGAACGAGGAACTCATCAAATACGGTTTTCCCGAAGACATCTGGTTCCATGTTGATAAAATGTCTTCAGCCCATGTCTATGTCAGGCTACACAGAGGCCAGACTGTTGACGACATGAGTGAAGGTTTACTGGAAGACTGTGCTCAGCTTGTCAAAGCAAATTCAATTCAAGGAAATAAAGTGAACAATATTGATGTTGTTTACACTCCCTGGTCCAATTTAAAGAAAACTGCTTCAATGGATGTTGGTCAAGTTGGTTTTCACAACCCAAAAATGGTTCGAACTGTGAGAGTTGAGAAGCGGATAAATGAGATTGTTAACAGGCTAAACAAGACAAAAGTGGAAAGGAAACCTGATTTTAAAGCTGAGCGAGAAGCAGTTAATGCAGCTGAAAGAGCTGATAGAAAACAACATCTGAGAGAAAAAAAACGCCGTGAGGAATTGGAAAGACTTGAAAAGGAGAGACAAACAGAGCTTAGGAGCTACAAGGGTTTGATGGTTGCAGAAAATATGACATCCAACAAACAAATTGCATCAGGAAGCAAATCCTTGCAAGAACTCGAGGAGGATTTCATGTAA 648 0.4151 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYVRLHRGQTVDDMSEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVRVEKRINEIVNRLNKTKVERKPDFKAEREAVNAAERADRKQHLREKKRREELERLEKERQTELRSYKGLMVAENMTSNKQIASGSKSLQELEEDFM 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3309 215 PANTHER DUF814-RELATED 1 215 IPR039730 -
Ssu1g3309 215 PANTHER OS01G0750500 PROTEIN 1 215 - -
Ssu1g3309 215 Pfam NFACT protein RNA binding domain 1 112 IPR008532 -
Ssu1g3309 215 MobiDBLite consensus disorder prediction 196 215 - -
Ssu1g3309 215 MobiDBLite consensus disorder prediction 148 179 - -
Ssu1g3309 215 Coils Coil 159 184 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3309 - - gmx:100802228 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3309 1 85851525 85854074 Ssu1g3309 1 85851525 85854074 ECH