Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3300 ATGATGAAAGTTGTACCGGCGAGACCGCTTCCAACGGGGCACGTGCGAACTATGATAAGCCGCACGTGCCTTGAGCATTCAACAATTACCACCAACCCGCCAACGTTACTAAATTATAAACACGGAACGCATTTCACATGGGAAAGCAAAACCATCGCTCAAGCTCGCGCTCGCACTCGCACTCACAgtaaaatccaaaccaaaatgGTGGAAAAAGAAGGCATTGAAGAAGCTCAGAGCAAGTACCGATCAGAGTTCCTTCAAGTCCTGCGTAGTAGGCGACCCGCTCAAGTTCCACTAACTGTCGAACTCGCGAAGCCAGTGGCTAATCCTTTGCATCAGAACTCTCCTCCAACGATCGAAGAGATCGAGATAATGGAGTCGTGTCCGAAGGCTGATATAGAGAACCTTGAAGAGTTGCTCGAGGAGGAGAACCTCTACTTGAATATAGAGGAAGGAGAGCAAGGACGGTTGCCtttgttgattttgaagttGAAGGAAAGCGGTAGGCAGAGTAAAAGGCCTGCAGTTGTTTTTCTTCACAGTACGAACAAATACAAAGAAGTCCTGCGTCCAGTGCTTAAGGCGTATGCTTCGCGAGGATATATAGCAATCTCCGTTGATTCTCGTTACCATGGAGAACGTGCCACCAGCACAACCACCTATCGCGATGCACTTATTTCTGCATGGAAAACCGGAGTGACGATGCCATTCATATATGACACGGTGTGGGACTTGTTTAAATTGGCAGATTATCTGACACAGAGAGAGGATATAGACCCTTCTAGGATAGGAATCACCGGAGTATCACTTGGAGGAATGCATGCATGGTTTGCTGCTGTTGCTGATACTCGCTATGCTGTGGTTGCTCCTCTGATTGGTGTTCAGGGATTTCGATGGGCCATAGACAACGATAAATGGCAGGGTCGAGTTAATAGTATAAAGCCTCTTTTTGAGGCGGCTCGTGATGATTTAAGTAAAGGTGCTTTTGACAAAGAAGTGGTGGAGAAGGTGTGGGACCGAATTGCTCCTGGTTTAGCTTCCCAATTTGATTCACCTTATTCAATTCCAGCTATCGCACCACGTCCTTTGCTTATTCTTAATGGTGCGGACGATCCTCGGTGTCCCATTGCAGGCTTGGAAATTCCAAGGTCAAAGGCAAGCCAGGCATACAGAGAGTTTCACTGCTTAGATAATTTCAAGTTTATTGCAGAACCTGGAATTGGACACCAATTAACGAGATTTCAGCTGAAAGAATCATCTGATTGGTTTGACAGGTTCTTAAACCCTTAG 1293 0.4548 MMKVVPARPLPTGHVRTMISRTCLEHSTITTNPPTLLNYKHGTHFTWESKTIAQARARTRTHSKIQTKMVEKEGIEEAQSKYRSEFLQVLRSRRPAQVPLTVELAKPVANPLHQNSPPTIEEIEIMESCPKADIENLEELLEEENLYLNIEEGEQGRLPLLILKLKESGRQSKRPAVVFLHSTNKYKEVLRPVLKAYASRGYIAISVDSRYHGERATSTTTYRDALISAWKTGVTMPFIYDTVWDLFKLADYLTQREDIDPSRIGITGVSLGGMHAWFAAVADTRYAVVAPLIGVQGFRWAIDNDKWQGRVNSIKPLFEAARDDLSKGAFDKEVVEKVWDRIAPGLASQFDSPYSIPAIAPRPLLILNGADDPRCPIAGLEIPRSKASQAYREFHCLDNFKFIAEPGIGHQLTRFQLKESSDWFDRFLNP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3300 430 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 79 428 - -
Ssu1g3300 430 PANTHER ESTERASE YITV-RELATED 79 428 - -
Ssu1g3300 430 SUPERFAMILY alpha/beta-Hydrolases 156 429 IPR029058 -
Ssu1g3300 430 Gene3D alpha/beta hydrolase 40 429 IPR029058 -
Ssu1g3300 430 Coils Coil 134 154 - -
Ssu1g3300 430 Pfam Alpha/beta hydrolase family 177 386 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3300 Ssu-Chr1 85697597 85701965 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3300 - - gmx:100789212 724.931