Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3299 atgGCGGGAAAAGAAGCTCAGAGCAAGCTCCGTTCAGAGTTCCTGCAACTCCTGCGTAGTAGGCGACCCGCTCAAGTTCCACTAACTATCGAACTCGCGAAGCCGGTGGAGAATCCTTTGTATCAGAACTCTCCTCCAACGACGGAAGAGATCGAGATACTGGAGTCGACTCCAAAGGCAGATATAGAGAACCTTGAAGAGTTGCTCGAGGAGGAGAACCTCTACTTGAATATAGAGGAAGGAAAGCAAGGACGGTTGCCTGTgttgattttgaaattgaagGAAGGCGACAAGCAGAGAAAAAGGCCTGCAGTTGTTTTTCTTCACAGTTCGTACAGTACCAAAGAAGCCGTGCGTCCATTGCTTAAGGCATATGCTTCGCGAGGATATATTGCAATTTCTGTTGATTCTCGTTACCATGGAAAACGTGCCGCCAACAAAACCACCTATCGCGATGCACTTATTTCTGCATGGAAAACTGGTGAGACGATGCCATTCATATATGACACGGTCTGGGACTTGATTAAATTGGCAGATTATCTAACACAGAGAGAGGATATAGACACTTCTAGGATAGGAATCACTGGAGTATCACTTGGAGGAATGCATGCATGGTTTGCTGCTGCTGCTGATACCCGCTATGCTGTTGTTGTTCCTGTGATTGGCGTTCAGGGATTTCGATGGGCCATAGACAATGATGAATGGCAGGGTCGAGTTGGTAGTATAAAGCCTGTTTTTAAGGTGGCTCGTGATGATTTGGGTAAAGGTGCTATTGACAAAGAAGTGGTAGAGAAGGTGTGGGACCGAATTGCTCCTGGTTTAGCTTCCCAATTTGATTCACCCTATTCAATTCCAACTATCGCACCACGTCCTTTGCTTATTCTTAACGGTGCGGAAGATCCTCTGACTCCTCTTGGAGGCTTGGAAACTCCAAGGGCAAAGGCAAGCCATGCATACGGAGAGTTTCACTGTTTAGATAATTTCAAGTTTATTGCAGAACCTGGAATTGGACACCAATTAACGAGATTTCAGCTGAAAGAATCATCTGATTGGTTTGACAGggTAAGGCTACAGGGTTTGGTTTGTAATTCTTCTCTAGTGATTTTGGCTTCACGGTGCGATGGCAGTGTGAGTGGCGTCGCTGTTACTGGGGTCAAGCgagaaagaagaaatgagaaagaaatgGGGGAGGGAGAGAGACgaaagatgaagaaggagaagaggggGGAAAGAGAGATTAAAGatggagaagaaaagaaacaccACTGCATACGGCAGTCGGAAATTGCCGCGATGGTGCTTTACAAAAGTTTCCGgtga 1320 0.4318 MAGKEAQSKLRSEFLQLLRSRRPAQVPLTIELAKPVENPLYQNSPPTTEEIEILESTPKADIENLEELLEEENLYLNIEEGKQGRLPVLILKLKEGDKQRKRPAVVFLHSSYSTKEAVRPLLKAYASRGYIAISVDSRYHGKRAANKTTYRDALISAWKTGETMPFIYDTVWDLIKLADYLTQREDIDTSRIGITGVSLGGMHAWFAAAADTRYAVVVPVIGVQGFRWAIDNDEWQGRVGSIKPVFKVARDDLGKGAIDKEVVEKVWDRIAPGLASQFDSPYSIPTIAPRPLLILNGAEDPLTPLGGLETPRAKASHAYGEFHCLDNFKFIAEPGIGHQLTRFQLKESSDWFDRVRLQGLVCNSSLVILASRCDGSVSGVAVTGVKRERRNEKEMGEGERRKMKKEKRGEREIKDGEEKKHHCIRQSEIAAMVLYKSFR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3299 439 Pfam Prolyl oligopeptidase family 126 223 IPR001375 GO:0006508|GO:0008236
Ssu1g3299 439 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 354 - -
Ssu1g3299 439 MobiDBLite consensus disorder prediction 388 419 - -
Ssu1g3299 439 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 354 - -
Ssu1g3299 439 Gene3D alpha/beta hydrolase 4 359 IPR029058 -
Ssu1g3299 439 Coils Coil 62 82 - -
Ssu1g3299 439 SUPERFAMILY alpha/beta-Hydrolases 72 354 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3299 Ssu-Chr1 85669723 85694785 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3299 - - gmx:100807180 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3299 1 85669723 85694785 Ssu1g3299 1 85669723 85694785 ECH