Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3297 ATGGGATCGTATATTCACATTGACTCAATCTCTATAGATCTTGCCGATTCTATTGGCAAGCGAGATACAGGCAAATGTGAACATTTCTCGATACGTGGATATGTGTCTGAAATTCGTGAAAAAGACTGGAAAATTTGTTGGCCATTTCCAGTACATGAGTCTGACAAACAACCATCACTTCTGCCATTAGATGTACCAAAATATAGATGTCAGCATTGTCAAAACTCTCCACAAGAAATTGCTGCCAAGGACATCCTGAAAGATGACCAACCAGACTTTGATTGTTGCAGTACTGGATGTAGATCTGGTAGCAACTGCAGTAATGCAGCTCTCAAGTCTGGTATTCAGCAAGGTCCAATGCTTGACACTgttgagagaagagaaattgaTCTTAATACTACTCTGAGCTGTGTCAATGATTACTTGCCAAATAGTAATGAGAAAGGCAAGAAAGCTGGAGTTGTACCTAGCAGAATAATTGACCTTGAGATTGGCTTGGAGGATAATCTCAATCACCAACTAACTAGTGTTCCATCACCTAAAACTTATCCAGACCTCTCACCAGAAGTGCACACTTCTAAAGAAGTCTGTGAAGGTAATGAAGTTTCTTATCCTGAGCTCGCTAGCAATCTGAAATCCATGGAGAAGAGTTCTACTGAGATGTGTAATGGAGGAACACCTGCAGATAACCAATGCCAGAAAGATTTAATAAAAGCTTGCTCAGTTTTGGGGAAAGGAACAACAGTAACGGAGGTGGACAATACATACGATCATACAACTGGACCTCCTCTTGAATCAGTTGCTTGTAATCATGCTGCACCTGCAGGAAGTATGGACAATACGGTTGAAAATGATTTTCCGGATCATCATTCAGAAAAGTCCACTGGTTTGTCTCGTAGGAGACCTCGGAAGGTGCGCTTGATGGCTGATTTATTAAGTGACAATGGTGAATTGAAGACTGAGCAGATCTCTATACAAGAATCCCTATCCTATGGTACTTCCAATGCCTCTGCAGCTTCACAGACACACTCAATTTTGCCAGGAAAGGTGGATATTCAAGGAGGTTTGACTTTGACGAGCACAGGTCCGagtagaaaaaggaagtttCCTCTGGATGAGGTTCGGAGACCTGCAAGCATGTGTTTTCAGAGGGTCGAAAATGAAGTACAGAACTCAGAGGGAGAGGTAAAAACAACTGATACTGTTTTGGATACTAGATCCAATTCCAAAGATGTACCTGTGGGATTAGGTTTGCAAGATGCTGCGAAGGGCCACTGGAGTAAACCTGATACTGAAAGAAGCCATATCATGGgtaagaagaagaacaaaaagatcCAAGTTGTAGATAATTGCTTGATTCCTGAGCAACCACAAGGACAGCAAAGAGAAAATGTAGACACCATGGATCCTACAGACAAGACATATGCATCTAAAACTAATTCTTCTAGATTAGCTCCTAGTGCATTCACAGGGAAAGGGATGGATAATTTTCCTATCTGCACCCTAAGAATAGAAAATGAGTTCAATTTGTCCAAACAAAAGGGGAAAATGCTGCAAACCGATGGGGAGCTGGAGTCTTTATCCTTGCAGAAAAATAACATGCTTGTACAAGATTCCTGTGCATATTCAGGGGAAAAAGCCAACTCTACTATGCCTGTAACAATTCCACTTCCTTCAGCCCAAGGGATGCTAAATGATAAAGGACTGGAAGAGGGACTGCATCTTTCCCTAAACAATTATGTGGTGGAAGCACATGTTTACAACAAAAAATGTATCCATCAAATTGATAATCGCCTACCTTTCTCAATGCCTTTTCAAGATGGAACTTCAAAAGTACCACAGCTTAATTGGAAAGACAGTGATACCAATGTTTTTGGAGGCCAAAACATTCCTTCCAAGCACCCAACAAATGCTCTTTCTGGAAAAGGAGTTCATTGTGAAgAAATTAATGGTGCAAGAAACACACAAAAAACTATTGAAGCTGTGGACCAACTAGGTTTTATGAAAAGATACAGTGGTGAACAAACAGTGGAGGTGTCTGAGCAGGGAACACTAGATGATATACCCATGGAAATTGTGGAACTATTGGCGAAGAATCAGTATGAGAGGTGTCTTCCTGATGTAGAAAATAGAAGCTCCACATTAGAAAAATCCACTCTTGGAAGGAAAACACAGATGACAGGTGGCTCTACTGTACACGGAAAAGGGGAGATGAGCTTGTTAAAAGCAGGCCAAAAGGAGAAACCTCAGGGAAGacataacaaaaacaacatGGTCACAAGAGGAGAGAATGTGAAGCCTAGCAAAAGAAAGCCAGTTCATTACTTTTCTTCATTTGATGGAAACAATTTGGGCATGAATAATCTATGTCCACCTCAATCCCCCTTTGGATTTGAAGTTTCCCAGTCCCAAAAGAAGCCATCAAGTGGATTCCAGTTTTCACCTATGGGTTCTAGTCAGCTTGGTAGTGCTCGAAATTGCAGGTTGAATGGGAGTTTTGAAGAGCGTGGATCCCCTAATGCTACTTTTCAAGCCCAGGAGGATGTAGCTTACACAAGAATATCTTACATCAGGATGACGAAGCTTCTCGCATCTGGGCATCCTTGA 2607 0.4047 MGSYIHIDSISIDLADSIGKRDTGKCEHFSIRGYVSEIREKDWKICWPFPVHESDKQPSLLPLDVPKYRCQHCQNSPQEIAAKDILKDDQPDFDCCSTGCRSGSNCSNAALKSGIQQGPMLDTVERREIDLNTTLSCVNDYLPNSNEKGKKAGVVPSRIIDLEIGLEDNLNHQLTSVPSPKTYPDLSPEVHTSKEVCEGNEVSYPELASNLKSMEKSSTEMCNGGTPADNQCQKDLIKACSVLGKGTTVTEVDNTYDHTTGPPLESVACNHAAPAGSMDNTVENDFPDHHSEKSTGLSRRRPRKVRLMADLLSDNGELKTEQISIQESLSYGTSNASAASQTHSILPGKVDIQGGLTLTSTGPSRKRKFPLDEVRRPASMCFQRVENEVQNSEGEVKTTDTVLDTRSNSKDVPVGLGLQDAAKGHWSKPDTERSHIMGKKKNKKIQVVDNCLIPEQPQGQQRENVDTMDPTDKTYASKTNSSRLAPSAFTGKGMDNFPICTLRIENEFNLSKQKGKMLQTDGELESLSLQKNNMLVQDSCAYSGEKANSTMPVTIPLPSAQGMLNDKGLEEGLHLSLNNYVVEAHVYNKKCIHQIDNRLPFSMPFQDGTSKVPQLNWKDSDTNVFGGQNIPSKHPTNALSGKGVHCEEINGARNTQKTIEAVDQLGFMKRYSGEQTVEVSEQGTLDDIPMEIVELLAKNQYERCLPDVENRSSTLEKSTLGRKTQMTGGSTVHGKGEMSLLKAGQKEKPQGRHNKNNMVTRGENVKPSKRKPVHYFSSFDGNNLGMNNLCPPQSPFGFEVSQSQKKPSSGFQFSPMGSSQLGSARNCRLNGSFEERGSPNATFQAQEDVAYTRISYIRMTKLLASGHP 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3297 868 MobiDBLite consensus disorder prediction 391 441 - -
Ssu1g3297 868 MobiDBLite consensus disorder prediction 795 840 - -
Ssu1g3297 868 MobiDBLite consensus disorder prediction 711 732 - -
Ssu1g3297 868 MobiDBLite consensus disorder prediction 274 301 - -
Ssu1g3297 868 MobiDBLite consensus disorder prediction 425 441 - -
Ssu1g3297 868 MobiDBLite consensus disorder prediction 710 775 - -
Ssu1g3297 868 PANTHER PROTEIN EMBRYONIC FLOWER 1 1 838 IPR034583 GO:0009910|GO:0045892|GO:0048367
Ssu1g3297 868 MobiDBLite consensus disorder prediction 740 754 - -
Ssu1g3297 868 MobiDBLite consensus disorder prediction 391 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3297 Ssu-Chr1 85611467 85615764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3297 - - gmx:100813480 1444.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3297 1 85611467 85615764 Ssu1g3297 1 85611467 85615764 ECH