Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3294 ATGGCCATGGCGATTAGGGTTTTTCTCATCCTTCTGCTCTTTCTCTCATCTACTAATCTCAGTTCTTCGCTTTACGAAGATCAAGTTGGCCTCATGGATTGGCACCAGCAGTACATTGGGAAAGTAAAGCACGCTTTGTTCCATACTCAAAAGACTGGGCGAAAGCGCGTTTTAGTGTCCACCGAAGAGAATGTCGTAGCTTCACTGGACCTTCGTCATGGAGAGATTTTTTGGAGGCATGTTCTTGGGACCAATGATGTTGTTGATGGACTTGACATTGCCCTGGGAAAATATGTCATAACTCTTTCCTCGGATGGAAGTATATTGAGAGCATGGAACCTTCCTGATGGACAGATGGTTTGGGAGTCTTCCCTTCAGGGCTCAAAGGCATCAAAGTCAATATTATACATTCCAAAAAACCTGAAAGCTGACAAGGATGATTTGATCCTTGTTTTTGGTAAAGGTTGTCTTTATGGTGTTTCCAGCATAGATGGTGAAGTTCTTTGGAGGCAAGATTTTGCAGGTGAAAGCTTTGAGATTAGCCATATTATTCAGTCCACTGACGAGATCTATGTAGCTGGTTTTGTTggttcttcaaaattttatgtgTATGGATTGAATGCTAAGAATGGAGAATTGCTAAAGAACGATCATACAACACTTCCGTGTGATACTTTTGGGGAATTATTATCAGTCTCAGGTGATAAGTTTGTGGGATTGGATAATACGAGGTCAAAGATATTAACAATAAACATCAAGAATGGAAAGATTAGTTACAAGCAGAAGGCTATTTCAGACCTCATCAAGGATTCATCTGGACGGGCAATAATATTACCATCTAGGCTTCCGGAGTTGTTTGCATTACATATCAATTCCCATGTTCTTTTAATTAAAGTGACAAATGAAGGTGAGTTGGTGTTGGtggacaaaattaataattcagCAGCTGTTAGTGATGCTTTGTCAATTTCGGAGGATCAACATGCTTTTGCATTTGTTCAACATGAAGACAGTGAAATTCACCTTTTTGTAAAGGATGTTAATGATTGGAATAGTGATTTGCTTAAGGAAAGTATAGTAATAGACCATCAAAGAGGGAACGTtgataagatttttataaacaattatgtGAGGACAGATAGATCTCATGGTTTTAGAGCATTGATGTTAATGGAGGATCATTCACTCTTATTAGTACAACAAGGAGAAATTGTCTGGAGTCGAGAGGATGGTCTTGCATCAGTAGTAGATGTAACAACTTCAGAACTACCTGTGGAAAAGGCAGGTGTATCAGTGGCAAAAGTGGAACAGAACCTCTTTGAATGGCTTAAGGGACATGTGCTGAAGCTCAAAGGAACTTTAATGATTGCAAGCCCTGAGGATGTAGTAGCTATTCAAGCGCTGAGGTTAAGGAGTTCTGAGAAAAGCAAAATGACTCGTGATCATAATGGTTTTCGTAAGTTGCTTATAGTACTTACAAGGGCAGGAAAGGTTTTTGCTTTGCACACTGGAGATGGACGTGTAGTTTGGTCTATTCTACTACATACTCTGCGTAAAACAGAAGCGTGTGAACATCCAGTTGGGCTTAACATTTATCAGTGGCAGGTTCCGCATCATCATGCATTGGATGAGAATCCATCTATCCTTGTAGCTGGGCGATGTGGAGCAAGTTTGGCCACACCAGCTgttctttcttttattgatgCCTACACAGGGAAGGAACTCAATTCTCTGAGTCTTGCTCATACTGTTACTCAAGTTATTCCACTGCCTTATACTGATTCAACTGAACAGCGTCTGCATCTAATTATAGACATAAACCAACATGCATACGTATACCCAAGAACTCCTGAAGCTATTGACATTCTGCAACGTGAATTTTCAAATGTGTACTGGTACTCAGTTGAGGCTGATAATGGTGTTATCAGAGGTCATACCTTGAAGAGCAATTGCATTCACATAGTGGATGAATACTGCTTTGACTTCAGGAATTTATGGTCTATTGTATTCCCATCTGAATCAGAAAAGATTATTTCAACAGTGACAAGAAAATCAAATGAGGTTGTTCATACTCAAGCCAAAGTTATGACTGACTACGATGTCATGTATAAGTATGTATCAAAGAATGTGCTTTTTGTGGCAAATGCAGCACCAAAAGCCAGAGGGGAAATTGGAACAGCCACCCCAGAGGAGGCATGGTTGGTCATCTATATCATCGATACTGTGACTGGTCGCATATTGCATCGCATGACTCATCATGGTTGCCAGGGTCCTGTTCATGCTGTATTTAGTGAAAACTGGGTTGTCTACCACTATTTTAATCTCAGAGCACACAGATATGAGATGTCAGTTGTTGAGGTCTATGATCAGTCTCGAGCGGATAACAAAGATGTCTGGAAATTTGTTCTTGGGAAGCATAATCTTACATCACCCATCTCTTCTTATTATCGATCGGAAGTTATAACAAAATCACAGTCATACTTTTTTACCCATTCTGTGAAAGCAATAGAAATGACTTCAACGGCAAAGGGTATAACCTCTAAGCAGCTTCTTATTGGAACAATCGGTGATCAGGTTTTGGCACTTGATAAACGCTTTTTGGATCCCCGGCGCACACTTAATCCTTCGCAAGCTGAGAAAGAAGAAGGAATTATTCCTCTTACTGATTCATTGCCCATCATTTCTCAGTCCTATATTACACATTCCCTTAAAGTGGAAGGTCTCCGAGGCATTGTAACAGTGCCTGCCAAGCTGGAGTCTACATCCCTCGTCTTTGCCTATGGAGTAGATCTATTTTTTACTCAGATTGCTCCTTCTAGGACTTACGATTCACTAACTGAAGATTTCAGCTATGCTCTACTTCTTCTAACAATTGTTGCACTTGTAGCTGCAATATTTGTCACTTGGGTATTATCCGAGAGGAAAGATCTACAAGAGAAATGGAGATGA 2949 0.3944 MAMAIRVFLILLLFLSSTNLSSSLYEDQVGLMDWHQQYIGKVKHALFHTQKTGRKRVLVSTEENVVASLDLRHGEIFWRHVLGTNDVVDGLDIALGKYVITLSSDGSILRAWNLPDGQMVWESSLQGSKASKSILYIPKNLKADKDDLILVFGKGCLYGVSSIDGEVLWRQDFAGESFEISHIIQSTDEIYVAGFVGSSKFYVYGLNAKNGELLKNDHTTLPCDTFGELLSVSGDKFVGLDNTRSKILTINIKNGKISYKQKAISDLIKDSSGRAIILPSRLPELFALHINSHVLLIKVTNEGELVLVDKINNSAAVSDALSISEDQHAFAFVQHEDSEIHLFVKDVNDWNSDLLKESIVIDHQRGNVDKIFINNYVRTDRSHGFRALMLMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKAGVSVAKVEQNLFEWLKGHVLKLKGTLMIASPEDVVAIQALRLRSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGRVVWSILLHTLRKTEACEHPVGLNIYQWQVPHHHALDENPSILVAGRCGASLATPAVLSFIDAYTGKELNSLSLAHTVTQVIPLPYTDSTEQRLHLIIDINQHAYVYPRTPEAIDILQREFSNVYWYSVEADNGVIRGHTLKSNCIHIVDEYCFDFRNLWSIVFPSESEKIISTVTRKSNEVVHTQAKVMTDYDVMYKYVSKNVLFVANAAPKARGEIGTATPEEAWLVIYIIDTVTGRILHRMTHHGCQGPVHAVFSENWVVYHYFNLRAHRYEMSVVEVYDQSRADNKDVWKFVLGKHNLTSPISSYYRSEVITKSQSYFFTHSVKAIEMTSTAKGITSKQLLIGTIGDQVLALDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIISQSYITHSLKVEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSRTYDSLTEDFSYALLLLTIVALVAAIFVTWVLSERKDLQEKWR 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3294 982 Pfam ER membrane protein complex subunit 1, C-terminal 764 981 IPR011678 -
Ssu1g3294 982 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 55 766 IPR011047 -
Ssu1g3294 982 Pfam PQQ-like domain 53 131 IPR002372 -
Ssu1g3294 982 Pfam PQQ-like domain 146 313 IPR002372 -
Ssu1g3294 982 PANTHER UNCHARACTERIZED 9 982 IPR026895 GO:0072546
Ssu1g3294 982 Gene3D - 30 344 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3294 K23562 - gmx:100807708 1808.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3294 1 85574766 85582571 Ssu1g3294 1 85574766 85582571 ECH