Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3292 ATGGAAGGCCTCTCAGAAATGGAAAATGTGATAGAAGAACCCCTTCTGAGCAAGCAGAACTCCAATCCCAAGGGAGGCTTCAGAACTTTACCTTTCATCATAGCAAATGAGGCATTTGAGAGACTGGCTAGCCTTGGGCTAATGCCTAACATGATATTGTACTTGACAAGAAAGTATGGCATGCAGACTGCAGGAGCCACTAATTTTCTCTTACTATGGTCTGCTGCCACCAATTTTACACCCTTCATTGGTGCTGTCCTTTCAGACTCCTATGTGGGTAGATATTCCATGATTGCTTTTGGATCTATCGCAAGCCTACtgGGAATGGTTCTTCTGTGGTTAACAACTGTCATTCCTTTGGTAAAGCCAGTTTGTAACCAATTTACCAACAGCTGCAGTAACTCCCCCACAACTATTCAGCTTTTGATCTTGCATTCTTCTTTTGCCCTGATGGCCGTTGGAGCTGGAGGCATAAGGTCATCCTCCTTGGCCTTTGGTGTTGATCAGTTGAGTAAGAGGGACAAAGATGCAGGAATCCAAGAGAGCTACTTCAGCTGGTACTATGCTGCTGTTGCAATGTCATCACTGATAGGTTTAACTGTTGTTGTCTATATTCAAGATAAAATGGGGTGGGCAGTGGGGTTTGGAATTCCGGTTATCCTAATGTTTGTAGCCACTGTATCATTTTTCTTAGcttctcctttttatttaatggtGGGGGTTAAAAGGAACATGCTGAGTGGGTTAGCTCAGGTCCTTGTAGCCTCTTACAGAAATAGACTTCTGCAATTACCACAGGAGGAAGAGAATGGTATCTACCACCATGAGAAGGATTCCAATCTCCTAGTGCCAACTGAAAAATTAAGGTTTCTCAGTAAAGCATGCATAATTAGAAATCCATTACAAGATCTAACACCAGATGGAAGAGCTTTGAATCCATGGAATCTTTGCACAGTAGACCAAGTGGAAGAACTCAAGGCACTTGTCAAGATAGTCCCAATTTGGACAACACGAATCATGATTGGTGTGAACCTGAGTCAGGGTTCCTTTCTGGTACTAGAGGCGTCCTCCATGGACCGCCACGTTACTTCAAACTTCCAAATTCCTTCAGCCTCCTTTGGGACATTTATGATTCTATCTCTAATACTTTGA 1152 0.4245 MEGLSEMENVIEEPLLSKQNSNPKGGFRTLPFIIANEAFERLASLGLMPNMILYLTRKYGMQTAGATNFLLLWSAATNFTPFIGAVLSDSYVGRYSMIAFGSIASLLGMVLLWLTTVIPLVKPVCNQFTNSCSNSPTTIQLLILHSSFALMAVGAGGIRSSSLAFGVDQLSKRDKDAGIQESYFSWYYAAVAMSSLIGLTVVVYIQDKMGWAVGFGIPVILMFVATVSFFLASPFYLMVGVKRNMLSGLAQVLVASYRNRLLQLPQEEENGIYHHEKDSNLLVPTEKLRFLSKACIIRNPLQDLTPDGRALNPWNLCTVDQVEELKALVKIVPIWTTRIMIGVNLSQGSFLVLEASSMDRHVTSNFQIPSASFGTFMILSLIL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3292 383 Pfam POT family 96 383 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu1g3292 383 Gene3D MFS general substrate transporter like domains 9 383 IPR036259 -
Ssu1g3292 383 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 23 383 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu1g3292 383 SUPERFAMILY MFS general substrate transporter 40 233 IPR036259 -
Ssu1g3292 383 PANTHER PROTEIN NRT1/ PTR FAMILY 1.3 23 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3292 Ssu-Chr1 85527683 85529562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3292 7 383 Organic Solute Cotransporters AT1G52190 50.900 3.07e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3292 K14638 - gmx:100809846 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3292 1 85527683 85529562 Ssu1g3292 1 85527683 85529562 ECH