Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3281 ATGGTGCCATTGCCCAACAGAACATCCTTAGATTCAGAAACGGATTCAAGAAGTCCTGTGGTATCAGTCACTTCAGCTGCAACCTCAGTGAAATCGGACACAACTGGTCCACTTTACAAGGATGGAAACTCAGATCCTTTGCAAGGTAGTAGTAACTTGACATTCAATAATGGTAAACCTGAGACTGCAAAGAGTTCCAAAAAGAAGCCATCTAAAGTAGTTTCGATATCGGAGATGAATTTGCTGTTGCAGCACAATCATGATTCTTCCCAGCTAGTGAAACCAGCAAGGTCTTCAGCTGTTGATCTGGAAATATTACATGCCAAATCAGAGATTTTAAATGCACCCATCATTGTGAATGATTCAAGACTTTACTCACCTTTATACAGGAATGTCTCCATGTTTAGAAGGAGTTATGAACTAATGGAGAAGATGCTAAAAGTTTACATCTACCAGGATGGAGACAGACCAATCTTTCATGAGCCCTTATTGGATGGAATATATGCATCTGAAGGATGGTTCATGAAATTAATGGAGGCAAACAAACAGTTTGTCACTGGAGACCCTGGGAAGGCTCACTTGTTTTACATACCTTTCAGTTCAAGATTGTTGCAGCAAACTCTCTATGTACGTAATTCACACAGACGTTCCAACTTGATTAAGtacatgaaaaattatgtgGACATGATTGCTGGAAAGTATCCTTTCTGGAATAGAACTTCTGGAGCAGATCACTTTGTTGTTGCTTGCCATGATTGGGCTCCTGCAGAAACAAGAGGGCGCATGCTTAGTTGCATTAGAGCCCTCTGCAATGCTGACATTGAAGTAGGATTCAAGATAGGCAAGGATGTTTCTCTTCCAGAAACATATATAAGGTCAAGTGAGAATCCTGTCAAAAATATAGGGGGCAACCCTCCTTCTCAGAGGCCAATCCTGGCCTTTTTTGCAGGTGGTTTGCACGGTTATGTTCGGCCTACTCTGTTGAAGCATTGGGAGAACAAAGAACCTGACATGAAAATAACTGGTCCCTTGCCAGATGTCAGGGGTAATACAAACTACCTCCAGCTCATGAAGAGCAGCAAATTCTGCATCTGTGCAAGAGGTCATGAAGTTAATAGCCCGCGTGTGGTAGAGGCTATATTCCACGAGTGCATTCCAGTTATCATATCTGACAATTTTATTCCTCCTTTCTTTGAGATTTTGAGCTGGGAATCTTTTGCTGTGTTTGTCATGGAGAAAGACATCCCTAATTTGAGGAACATATTGCTGTCCATCTCTGAAGAAAGATACTTAGAGATGCATAAGAGGGTGAAAAAGAACAGAAAATCTCTCATTTTATAA 1341 0.4079 MVPLPNRTSLDSETDSRSPVVSVTSAATSVKSDTTGPLYKDGNSDPLQGSSNLTFNNGKPETAKSSKKKPSKVVSISEMNLLLQHNHDSSQLVKPARSSAVDLEILHAKSEILNAPIIVNDSRLYSPLYRNVSMFRRSYELMEKMLKVYIYQDGDRPIFHEPLLDGIYASEGWFMKLMEANKQFVTGDPGKAHLFYIPFSSRLLQQTLYVRNSHRRSNLIKYMKNYVDMIAGKYPFWNRTSGADHFVVACHDWAPAETRGRMLSCIRALCNADIEVGFKIGKDVSLPETYIRSSENPVKNIGGNPPSQRPILAFFAGGLHGYVRPTLLKHWENKEPDMKITGPLPDVRGNTNYLQLMKSSKFCICARGHEVNSPRVVEAIFHECIPVIISDNFIPPFFEILSWESFAVFVMEKDIPNLRNILLSISEERYLEMHKRVKKNRKSLIL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3281 446 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 39 442 IPR004263 GO:0006486|GO:0016757
Ssu1g3281 446 MobiDBLite consensus disorder prediction 1 70 - -
Ssu1g3281 446 Pfam Exostosin family 143 423 IPR040911 -
Ssu1g3281 446 MobiDBLite consensus disorder prediction 7 61 - -
Ssu1g3281 446 PANTHER GLYCOSYLTRANSFERASE PLANT-LIKE PROTEIN 39 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3281 Ssu-Chr1 85327775 85330535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3281 - - gmx:100817335 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3281 1 85327775 85330535 Ssu1g3281 1 85327775 85330535 ECH