Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3266 ATGGAGCAGAATCAGCAAAAGCTTCGAAAGGCTGTCTCGGACGTGTCCAAGGAAATTGACAAGTACTATAATAACCTGGAGTTGGAGAGGCAACTTGGTGCTATTGAAGAGGTGGAACAAGCTGAATGCCAGTGTTGTGGGTTGAACGAGGAGTGCACCGCAGTTTATATCACAGAGGTTCGAGAATGTTATTGTGGAAAGTGGGTTTGTGGGCTTTGTTCTGAAGCTGTTAAAGAAAGAGTAGGGCGGGGTCCTAAAGTAGCCATGCAAGATGCTTTGAACTCCCACAGGGATTTCTGCCAGGAATATAACGCCACCACTAGACTTAATCCCCAACTCTCATTAACTTTTTCTATGAGGGAAATAGCCAAAAGAAGTTTAGAGAATAGGAAATCTAAGGGGTTAAGCATAACAAAACTTAGTCGAACCACTAGTTACCCCTAA 444 0.4369 MEQNQQKLRKAVSDVSKEIDKYYNNLELERQLGAIEEVEQAECQCCGLNEECTAVYITEVRECYCGKWVCGLCSEAVKERVGRGPKVAMQDALNSHRDFCQEYNATTRLNPQLSLTFSMREIAKRSLENRKSKGLSITKLSRTTSYP 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3266 147 PANTHER OS01G0745000 PROTEIN 2 146 - -
Ssu1g3266 147 Pfam Protein of unknown function (DUF1677) 38 125 IPR012876 -
Ssu1g3266 147 PANTHER OS01G0745000 PROTEIN 2 146 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3266 Ssu-Chr1 84996265 84996810 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3266 - - gmx:100776718 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3266 1 84996265 84996810 Ssu1g3266 1 84996265 84996810 ECH