Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3265 ATGACCAATGATTTTCAAAGCACAGTTTCCGAAATAACCTTTGAACGCAACAAAGAAGTGTCCCTAGAAGAAACACGCGAGTTACCAACCGTGTCCGAGGTAGACAATGCCAAATGCGAGTGTTGTGGAATGTGTGAGGAGTGCACTCACGAGTACATAAAGCGCGTGCGTGACATGTTCTCGGGGAAGTTAATATGTGGGTTGTGTGCTGAAGCAGTGAATGTGGAGATGGAGAAGAATGGTGGAAAGCGAGAGGAAGCTCTGAAAGAGCATATGAGCGATTGTGTGAAGTTCAATAGGCTTGGTAGGTCACATCCTGCTTTGTATCAAGCTGAAGACGTCAAAAAGATCTTGAAGAAGACCTTAAGCAGGGCCATGTCTACCAGCCCTACAGGTTTTAAGGGTAGTCAAAGCGAGATTGGGACTGGTGGGACACAGGGACGATGA 447 0.4676 MTNDFQSTVSEITFERNKEVSLEETRELPTVSEVDNAKCECCGMCEECTHEYIKRVRDMFSGKLICGLCAEAVNVEMEKNGGKREEALKEHMSDCVKFNRLGRSHPALYQAEDVKKILKKTLSRAMSTSPTGFKGSQSEIGTGGTQGR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3265 148 MobiDBLite consensus disorder prediction 126 148 - -
Ssu1g3265 148 Pfam Protein of unknown function (DUF1677) 34 120 IPR012876 -
Ssu1g3265 148 PANTHER OS01G0745000 PROTEIN 2 132 IPR012876 -
Ssu1g3265 148 PANTHER - 2 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3265 Ssu-Chr1 84957884 84958330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3265 - - gmx:100777256 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3265 1 84957884 84958330 Ssu1g3265 1 84957884 84958330 ECH