Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3264 ATGTCTTCCGCCGAGACGGAGATGGAGCCGCTGACGTCGGGGGCGAGCAACCGTATAATTCCGCTTCTGAAGGCGCTGAGGGCCTCGCTGATCTTCGTCTACACGTTCTTCCTCTCGTTCCTGCTGTTCGTTCTCCCCCGGCGGCGCCGCCTCTCCCCCGCGGCGGGGCCGCCGTCGCCGAAGAAGCATTTGAGGCGGCGGTGGCTGGTGCGGGAGGACGAGGACACGTGCCGGAGAAGGGCGTTGGCGCAAGATGTGGGAATGGGTCGCGACGAGGGGTGGTGCCGGTGCAGCACCTCTATCTTCTATGGGGTTAGAAACAACGCCTTGTTTTGCCGCTCGTGGTTCCCGGTCTACGGTGATGTTAAGGGCATTCTGATCATCATTCATGGGCTTAATGAACACAGTGGAAGATATGCGGACTTTGCAAGGCAATTAACATCATGCAACTTTGGTGTCTATGCAATGGACTGGATAGGTCATGGAGGTAGTGATGGATTGCATGGTTATGTTCCTTCTCTTGATCATGTGGTTGCAGACACGGGGGCTTTCCTGGAAAAGATTAGATCAGAGAATCCTGGGATACCATGTTTTCTCTTTGGTCACTCCACTGGGGGGGCTGTGGTCTTGAAAGCGGCTTCCCGTCCTCATATTGAAGTAATGGTGGAAGGAATTATATTAACCTCACCAGCTTTACGTGTGAAGCCAGCTCATCCAATTGTTGGTGCTGTAGCTCCAATTTTTTCTCTGGTAGCTCCGAAATTCCAATTTAAAGGAGCAAACAAAAGGGGCATTCCAGTTTCGAGGGATCCGGCAGCTTTGTTGGCGAAGTACTCTGATCCTTTGGTCTACACAGGACCTATAAGGGTCCGAACTGGCCACGAAATATTGCGGATATCCTCTTACTTAATGCGAAACTTCAACTCCGTGACAGTACCATTCTTTGTCCTGCACGGAACTGCTGATAAGGTTACTGATCCACTGGCCTCACAAGATCTATACGATAAGGCAGCTTCGAAGTTCAAAGACATAAAGCTTTATGATGGCTTCTTGCACGACCTTCTGTTTGAGCCTGAGCGTGAAGAGATAGCTCAGGACATTATCACCTGGATGGAAAAGAGATTATTTGCTATTTGA 1137 0.5092 MSSAETEMEPLTSGASNRIIPLLKALRASLIFVYTFFLSFLLFVLPRRRRLSPAAGPPSPKKHLRRRWLVREDEDTCRRRALAQDVGMGRDEGWCRCSTSIFYGVRNNALFCRSWFPVYGDVKGILIIIHGLNEHSGRYADFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIRSENPGIPCFLFGHSTGGAVVLKAASRPHIEVMVEGIILTSPALRVKPAHPIVGAVAPIFSLVAPKFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLMRNFNSVTVPFFVLHGTADKVTDPLASQDLYDKAASKFKDIKLYDGFLHDLLFEPEREEIAQDIITWMEKRLFAI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3264 378 PANTHER PHOSPHOLIPASE-RELATED 60 375 - -
Ssu1g3264 378 Gene3D alpha/beta hydrolase 98 375 IPR029058 -
Ssu1g3264 378 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 60 375 - -
Ssu1g3264 378 Pfam Serine aminopeptidase, S33 121 359 IPR022742 -
Ssu1g3264 378 SUPERFAMILY alpha/beta-Hydrolases 107 375 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3264 Ssu-Chr1 84912236 84915991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3264 1 295 Acyl Lipid Metabolism Gene Families AT5G11650 67.987 1.91e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3264 - K01054 gmx:100816265 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3264 1 84912236 84915991 Ssu1g3264 1 84912236 84915991 ECH