Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu1g3263 | ATGGCAGAGGGATCCGATCCAAAGTGGGAAGGTAAAGCCGTGGTTGAGCTAGCAAGCACGGGCGCCGAGCTAGTATGGCCTGCGTTAGAGGATTTCTGCAACCTACACAAGTGGATCCCCATAGACACATGTTACCAAGTAGAGGGACTTCCGGGTCAACCCGGCCTCGTCCGCTACTGTGGCTCCGCCGTTAAAGGGGTCGGTGACGATGCAGCCGAGACAACAACCGTCATGTGGGTCAAAGAGAAGCTACTCGCGATCGATCCCGTCCGACGCTGTCTGTCCTATGAAATTCTTGAAAACAACGTGGGATTTAAGTCCTACGTGGCCACGCTCAAAGTGCTGCCAATCAACGGGAGTGGGTGCAAGATCGAGTGGGGGTTTGTCAGTGATCCAGTTGAAGGGTGGAGTTACCAAGATTTGAAGTCATACGTCGAGTCTTCTCTCCAGTCCATGGCCAAGAAGATTGAGCTTGCTTGCTCTGGAGCTGCTTAG | 495 | 0.5354 | MAEGSDPKWEGKAVVELASTGAELVWPALEDFCNLHKWIPIDTCYQVEGLPGQPGLVRYCGSAVKGVGDDAAETTTVMWVKEKLLAIDPVRRCLSYEILENNVGFKSYVATLKVLPINGSGCKIEWGFVSDPVEGWSYQDLKSYVESSLQSMAKKIELACSGAA | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu1g3263 | 164 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 16 | 155 | IPR019587 | - | |
| Ssu1g3263 | 164 | PANTHER | POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER | 6 | 160 | - | - | |
| Ssu1g3263 | 164 | SUPERFAMILY | Bet v1-like | 20 | 157 | - | - | |
| Ssu1g3263 | 164 | PANTHER | - | 6 | 160 | - | - | |
| Ssu1g3263 | 164 | CDD | PYR_PYL_RCAR_like | 9 | 157 | - | - | |
| Ssu1g3263 | 164 | Gene3D | - | 3 | 161 | IPR023393 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu1g3263 | Ssu-Chr1 | 84905503 | 84905997 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu1g3263 | - | - | gmx:100798368 | 262.307 |
Event-related genes