Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3250 ATGGCGTCCACCGACTCTGATTCGCAGTTGAAGATCGTACATGGCGAGGCCGGTTACATACTCGAAGACGTTCCTCACTTCTCCGACTATATTCCAAATCTTCCtACATATCCGAATCCGCTGCGATCCAATCCTGCTTACTCGGTTGTTAAGCAGTATTTCGTGCACATGGACGACACTGTTCCTCAAAAGGTTGTTGTTCATAAGGATAGTCCAAGAGGTGTACATTTTCGACGTGCAGGAGCTCGACAAAAGGTATACTTTAAATTGGATGATGTGCACGCATGCATTGTCACGTGTGGTGGACTCTGCCCTGGCCTCAACACTGTCATAAGGGAAATTGTCTGTGGTCTTTCTTACATGTACGGTGTTAACAAAGTCCTTGGCATAGATGGTGGTTATAGAGGCTTTTATTCCAAGAACACCATTACTTTAACACCTAAGGTGGTCAATGACATCCATAAACGTGGGGGTACGATTCTTGGGACATCACGAGGGGGGCATGATACTGGCAAGATAGTTGACAGCATCCAGGATCGAGGAATTAATCAGGTTTATATTATTGGAGGAGATGGAACACAGAGAGGAGCGGCTGTGATTTATGAGGAAGTTAGACGGCGGGGTCTGAAAGTGGCAATTGCTGGAATTCCTAAAACCATAGATAATGACATCCCGgtCATTGACAAATCCTTTGGTTTTGATACTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCAGCACATGTTGAAGCTGAAAGTATTGAAAATGGCATTGGTGTTGTGAAGCTAATGGGACGTTATAGTGGTTTTATTGCAATGTATGCTACTCTTGCTAGCAGAGATGTGGACTGTTGCTTGATTCCTGAGTCACTCTTCTACCTTGAAGGAAAGGGTGGactttttgaatttattgagAAAAGGCTGAAAGAAAATGGACATATGGTCATAGTCATAGCCGAGGGAGCTGGACAAGATCTTCTTACAGAAAGCATGCAAGCCATGGACCAGAAGGATGCTTCTGGAAACAAACTACTTCAAGATGTTGGTTTATGGATATCTCATAAGATCAAGGATCACTTCGCAAGGAAGGATAAGATGGCCatcaatcttaaatatatagATCCAACTTACATGATCCGGGCAATTCCAAGCAATGCATCAGATAATGTCTACTGCACACTTCTTGCTCAGAGTGCAGTCCATGGTGCAATGGCAGGGTATACTGGATTTACAGTTGGACTGGTCAATGGCAGACATACTTATATTCCATTCAATAGAATCATTGAGAGGCAGAACAAGGTTGTGATTACTGACAGAATGTGGGCAAGACTCCTTTCTTCAACCAACCAGCCAAGCTTTTTGAGCCCCAAAGATTTAGATGAAGCCAAGAAAGCAGAACAACCTCCGACTCAATTGTTAGAAGGGAACAATTgcaatgatgttgatgaagcCGAGAAAAAGAACAACCTCCCACTCAGTTGTTAG 1485 0.4249 MASTDSDSQLKIVHGEAGYILEDVPHFSDYIPNLPTYPNPLRSNPAYSVVKQYFVHMDDTVPQKVVVHKDSPRGVHFRRAGARQKVYFKLDDVHACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVLGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTGKIVDSIQDRGINQVYIIGGDGTQRGAAVIYEEVRRRGLKVAIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESLFYLEGKGGLFEFIEKRLKENGHMVIVIAEGAGQDLLTESMQAMDQKDASGNKLLQDVGLWISHKIKDHFARKDKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGLVNGRHTYIPFNRIIERQNKVVITDRMWARLLSSTNQPSFLSPKDLDEAKKAEQPPTQLLEGNNCNDVDEAEKKNNLPLSC 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3250 494 PRINTS ATP-dependent phosphofructokinase family signature 181 197 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu1g3250 494 PRINTS ATP-dependent phosphofructokinase family signature 232 250 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu1g3250 494 PRINTS ATP-dependent phosphofructokinase family signature 253 269 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu1g3250 494 PRINTS ATP-dependent phosphofructokinase family signature 214 231 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu1g3250 494 PRINTS ATP-dependent phosphofructokinase family signature 97 116 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu1g3250 494 PRINTS ATP-dependent phosphofructokinase family signature 310 322 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu1g3250 494 Gene3D - 91 279 - -
Ssu1g3250 494 PIRSF ATP_PFK_TP0108 1 458 IPR012004 GO:0003872|GO:0005524|GO:0006096
Ssu1g3250 494 MobiDBLite consensus disorder prediction 453 494 - -
Ssu1g3250 494 Pfam Phosphofructokinase 96 401 IPR000023 GO:0003872|GO:0006096
Ssu1g3250 494 SUPERFAMILY Phosphofructokinase 28 462 IPR035966 GO:0003872|GO:0006096
Ssu1g3250 494 Coils Coil 237 257 - -
Ssu1g3250 494 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 24 454 IPR012004 GO:0003872|GO:0005524|GO:0006096
Ssu1g3250 494 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 2 482 - -
Ssu1g3250 494 PANTHER - 2 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3250 Ssu-Chr1 84636271 84642621 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3250 K00850 - gmx:100818755 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3250 1 84636271 84642621 Ssu1g3250 1 84636271 84642621 ECH